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The map label for this gene is gerSC

Identifier: 218904700

GI number: 218904700

Start: 3419178

End: 3420314

Strand: Direct

Name: gerSC

Synonym: BCAH820_3584

Alternate gene names: NA

Gene position: 3419178-3420314 (Clockwise)

Preceding gene: 218904699

Following gene: 218904705

Centisome position: 64.48

GC content: 32.63

Gene sequence:

>1137_bases
ATGAGGCGCTTTATTCATTTCACTATACTTTACTTTCTCATAACCTTATTAACAGGCTGTGGAGATCGGCTAGACTTAGA
AAAACAATCCATTTCATTAATTTACGGTTTTGACGCAAAAGCAAAAGGAAAATTAATTGTGTACCACGTAAATCCTATTT
TTAATGAAGATGTAGAAAAGAAGTACGAAACACATGAAGCGAAAGTACGTACACCTCGAGAAGCCAAAGCAACGTTTAAT
AGTTCAAGTGGCGGTTTAGTATCTACAGAAAAGTTACAGCTCATTTTATTTAGCACAAAATTTTTAAAACAAGAAGGGGC
TATGCCCTACCTTGATGTTTGGTATCGCGATCCTAAAAATACTGGAAACATGCGCATGGTTGCAGTAGACGGGCCAATTT
CTTCTGTTATATATAATAACTTTAAAGATAAACCTGCTCTTCCTGAGTATTTAACAGATTTAATTAATACAAATAAATTA
TACAATCGGACAGTTTTCACACCATTTCATGAATTTCATAGGCAAACGTTTAATAAAGGTATAACACCTGCTATTTCAGA
AATAAAAAAAGGAAAAAAAGATGTTATCGTTACAGGCTCTGCACTATTAACTTCTCGCGGAATTTATAAGATGTCTTTAA
ATCGCTATGAAAGTGCCCTTCTGCTCATGTTGCAAAAAAAAGCTAATATACCTGTCTCACTTACAATGAAAATCCCTTCT
CATTCAGTTGAAACTAATAGTCATCTAAAAGATACAGAAGGTGAAGATTTCGTATCAATAAACGTTCTTAGCATGAATCG
TGATATCCGTACAGACTATAGCGATAACCATTTCAAATTTAATGTTAAAATGGATTTTAAAATTGCCGTATCTGAACTTA
CATTCAATATGGATATAGATAAAGATAGGAAGAAATTAACTTCTCTTATTACAAAACAACTAAACAAAGATTTGAACAAT
TTAATCCATAAAATTCAAAAACAACAACTCGATCCATTCGGATTTGGTGATTATGCGAGAGCGTTTCAATATGAAGAATG
GAAAAAAGTTGAAGACGATTGGCCGAGTGCTTTTTCAAAAGCTAACGTGAAAGTAGCACCTACTATTAAAATTTTAGAAA
ACGGGATTATTAAATAG

Upstream 100 bases:

>100_bases
ATTTTGGGGAACTGCCAGTTATTTTATCGTTTTTCTATTCCCAGTCGTATTTCTCTTATACATGACACTTTATCAGCATT
GGAAAAGGAGAAAAATTTAA

Downstream 100 bases:

>100_bases
CAAAAAACACGCTACTTGTTCTTATACGTTTAAAGAATAAGTAGCGTGTTATCATTTTATTTTGAAACTCCCTATATAGT
TACGCTTCTGTTTCTGATTC

Product: spore germination protein

Products: NA

Alternate protein names: Germination Protein Ger(X)C Family; Spore Germination B3 GerAC Family Protein; Spore Germination Protein GerKC; Spore Germination Protein KC; Spore Germination Protein SC

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRRFIHFTILYFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEKKYETHEAKVRTPREAKATFN
SSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKNTGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKL
YNRTVFTPFHEFHRQTFNKGITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
HSVETNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDIDKDRKKLTSLITKQLNKDLNN
LIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSKANVKVAPTIKILENGIIK

Sequences:

>Translated_378_residues
MRRFIHFTILYFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEKKYETHEAKVRTPREAKATFN
SSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKNTGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKL
YNRTVFTPFHEFHRQTFNKGITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
HSVETNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDIDKDRKKLTSLITKQLNKDLNN
LIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSKANVKVAPTIKILENGIIK
>Mature_378_residues
MRRFIHFTILYFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEKKYETHEAKVRTPREAKATFN
SSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKNTGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKL
YNRTVFTPFHEFHRQTFNKGITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
HSVETNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDIDKDRKKLTSLITKQLNKDLNN
LIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSKANVKVAPTIKILENGIIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43462; Mature: 43462

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFIHFTILYFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHH
KYETHEAKVRTPREAKATFNSSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKN
HHHHHHHHCCCCCHHHHCCCCCCCCEEEHHHEEEEEEEHHHHHHCCCCCEEEEEEECCCC
TGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKLYNRTVFTPFHEFHRQTFNKG
CCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHCCEEECHHHHHHHHHHHCC
ITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
CCHHHHHHHCCCCCEEEECHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCC
HSVETNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDID
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCC
KDRKKLTSLITKQLNKDLNNLIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHC
ANVKVAPTIKILENGIIK
CCEEECCHHHHHHCCCCC
>Mature Secondary Structure
MRRFIHFTILYFLITLLTGCGDRLDLEKQSISLIYGFDAKAKGKLIVYHVNPIFNEDVEK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHH
KYETHEAKVRTPREAKATFNSSSGGLVSTEKLQLILFSTKFLKQEGAMPYLDVWYRDPKN
HHHHHHHHCCCCCHHHHCCCCCCCCEEEHHHEEEEEEEHHHHHHCCCCCEEEEEEECCCC
TGNMRMVAVDGPISSVIYNNFKDKPALPEYLTDLINTNKLYNRTVFTPFHEFHRQTFNKG
CCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHCCEEECHHHHHHHHHHHCC
ITPAISEIKKGKKDVIVTGSALLTSRGIYKMSLNRYESALLLMLQKKANIPVSLTMKIPS
CCHHHHHHHCCCCCEEEECHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCC
HSVETNSHLKDTEGEDFVSINVLSMNRDIRTDYSDNHFKFNVKMDFKIAVSELTFNMDID
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCC
KDRKKLTSLITKQLNKDLNNLIHKIQKQQLDPFGFGDYARAFQYEEWKKVEDDWPSAFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHC
ANVKVAPTIKILENGIIK
CCEEECCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA