Click here to switch to the map view.

The map label for this gene is yrhD [H]

Identifier: 218904696

GI number: 218904696

Start: 3412663

End: 3413145

Strand: Reverse

Name: yrhD [H]

Synonym: BCAH820_3580

Alternate gene names: 218904696

Gene position: 3413145-3412663 (Counterclockwise)

Preceding gene: 218904697

Following gene: 218904695

Centisome position: 64.37

GC content: 35.2

Gene sequence:

>483_bases
ATGGCTGCACCTATAAAAATGATTCAAAAACAAGAATTAACTGAGGAAGAAGTAAAACAGCAAAAATTAGACGATTTAAA
AGAGCTTCTAGCTAATAATGAAGACGCTCTAAATCAAATGTTTAATATAGTAGGGGAATTGAATGATATTGGCATGCTAG
AAGCAGCAAATTCTATGCTAAAGGCGAAAGAACCAATCGCAAAGATTGTTCTTGGCCAAGTGACTCGTGAGCCTGTTACA
AATTTAATTAATAATATGATGGGGGCTGCGGGTGCTTTAACAGAACTTGATCCGGAGCTTACGAAAAAGCTTATAGGTAG
CTTATTAGTAGGGCTAGAAAAAGGTAATGAACATTTAGAGAGTAATAAAAAAGTAGGGGTATTCGATCTTATGAAAGTAT
TGAAAGACCCAGATATTAACCGTGCTATCGGGTTTGGGCTTCATTTCTTAAAAGGTATGGGAAAAGGATTAAAAGAAGAA
TAA

Upstream 100 bases:

>100_bases
GCGTAATAAAAAACGTCATCCTCAATCCGGTATTGAGGTACATCGTAAGTGGGCACGTCCAGGGTATGTGCATTTAACGG
ATAAGTAGGAGGAGAAAAAT

Downstream 100 bases:

>100_bases
ACTTCATGAAGTGAACCTTTTCGCCCAAATGTTTGTACGAAATAGTTTGGGCGGAAGGCTCATTTTGGTAAAATATATAA
TAAAGTAAAATGAGGTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAAPIKMIQKQELTEEEVKQQKLDDLKELLANNEDALNQMFNIVGELNDIGMLEAANSMLKAKEPIAKIVLGQVTREPVT
NLINNMMGAAGALTELDPELTKKLIGSLLVGLEKGNEHLESNKKVGVFDLMKVLKDPDINRAIGFGLHFLKGMGKGLKEE

Sequences:

>Translated_160_residues
MAAPIKMIQKQELTEEEVKQQKLDDLKELLANNEDALNQMFNIVGELNDIGMLEAANSMLKAKEPIAKIVLGQVTREPVT
NLINNMMGAAGALTELDPELTKKLIGSLLVGLEKGNEHLESNKKVGVFDLMKVLKDPDINRAIGFGLHFLKGMGKGLKEE
>Mature_159_residues
AAPIKMIQKQELTEEEVKQQKLDDLKELLANNEDALNQMFNIVGELNDIGMLEAANSMLKAKEPIAKIVLGQVTREPVTN
LINNMMGAAGALTELDPELTKKLIGSLLVGLEKGNEHLESNKKVGVFDLMKVLKDPDINRAIGFGLHFLKGMGKGLKEE

Specific function: Unknown

COG id: COG2427

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.fulgidus AF1717 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012440 [H]

Pfam domain/function: PF07849 DUF1641 [H]

EC number: NA

Molecular weight: Translated: 17579; Mature: 17448

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPIKMIQKQELTEEEVKQQKLDDLKELLANNEDALNQMFNIVGELNDIGMLEAANSML
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAKEPIAKIVLGQVTREPVTNLINNMMGAAGALTELDPELTKKLIGSLLVGLEKGNEHLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHH
SNKKVGVFDLMKVLKDPDINRAIGFGLHFLKGMGKGLKEE
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AAPIKMIQKQELTEEEVKQQKLDDLKELLANNEDALNQMFNIVGELNDIGMLEAANSML
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAKEPIAKIVLGQVTREPVTNLINNMMGAAGALTELDPELTKKLIGSLLVGLEKGNEHLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHH
SNKKVGVFDLMKVLKDPDINRAIGFGLHFLKGMGKGLKEE
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]