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The map label for this gene is ysdA [H]

Identifier: 218904684

GI number: 218904684

Start: 3404116

End: 3404364

Strand: Reverse

Name: ysdA [H]

Synonym: BCAH820_3568

Alternate gene names: 218904684

Gene position: 3404364-3404116 (Counterclockwise)

Preceding gene: 218904685

Following gene: 218904683

Centisome position: 64.2

GC content: 37.35

Gene sequence:

>249_bases
ATGAAATGGATTTATTTAATTCTTATTAACGTTATAGCTTTTAGCCTTATGGGGCTTGATAAACGGAAAGCGAAGAAGAA
ACAGTGGAGAACGCCAGAAAGTACGTTGTTTTTATCAGCGGCAGCTGGGGGCGCAGTTGGCGCTTGGATCGGTATGTATA
TGTTTCACCATAAAACTCATAAAAAGAAATTTGTTTTCGGTATACCGTTACTTGTCGTTATCACAATATGTTTACTATTT
GCTGTATGA

Upstream 100 bases:

>100_bases
AAGTAATGAATTAAACTAGTTTGATAAAAAGTGTTCTTCAGTTGTTTCCATCGTTTTTTCATGTTACGATTAAGCGAATT
TTTCGTAGGGAGAGAAAGCG

Downstream 100 bases:

>100_bases
GAAATGTCGAAAGAATTGCAGATTGATTATTGGTAAAGTGAGCACGTGGGACCGTATAATGGAGAAAAACGAGAAGAGGA
GAAAAGGAAGATGGGGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKWIYLILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTHKKKFVFGIPLLVVITICLLF
AV

Sequences:

>Translated_82_residues
MKWIYLILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTHKKKFVFGIPLLVVITICLLF
AV
>Mature_82_residues
MKWIYLILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTHKKKFVFGIPLLVVITICLLF
AV

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 9309; Mature: 9309

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWIYLILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHC
KKKFVFGIPLLVVITICLLFAV
CCHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKWIYLILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHC
KKKFVFGIPLLVVITICLLFAV
CCHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]