Click here to switch to the map view.

The map label for this gene is ybjJ [H]

Identifier: 218904492

GI number: 218904492

Start: 3217014

End: 3218207

Strand: Reverse

Name: ybjJ [H]

Synonym: BCAH820_3376

Alternate gene names: 218904492

Gene position: 3218207-3217014 (Counterclockwise)

Preceding gene: 218904493

Following gene: 218904491

Centisome position: 60.69

GC content: 40.45

Gene sequence:

>1194_bases
ATGAAGAAAGATTTTACAGAGAATGATACAAAGACGCTACTTGCCTCTCGAAATGCTCTATTCCTCTTATTTGCTTTGCC
AGGTGTCGCGTTTGCTACATGGATTTCTAGAACGGCAGCGGCGCGAGATATTTTAGCGGTGTCAAATGCAGAAATGGGCT
GGATTTTGTTCGGATTATCTGTCGGTTCAATAATTGGTTTACTGAGTGCAAGTCACTTTATTGACGGTAAGGGAGCTAGA
GACGTTATTATAGGTAGTATGTTTTTTATGATCGTTGGATTACTTTGTTTAGGTATTACTATTTATTTTGTTTCTAGTAT
GGGGGCTTTTGGTAGCTTACTAGTATTTGGAGTAGGATATGGATTAGCAGAAGTTGCATTGAATGTAGAGGGTTCTTCTA
TTGAGCAGAAACTAGGAACAACTCTTCTTCCGAAATTTCATGGCTTTTTTAGTGTAGGAACTTTAGTAGGCGCTCTCAGT
GGTTCTGCCGCCATCTCTCTTCATATCCCAATTTTGTATCAATTCCTTGCGATTTCGGTCGTGTTTGTATTACTTGTATG
TAGGTTGTATCGCTTTCTTCCGCATGGAACAGGAAAGAAGGAGAAATCACGGAACAAAAAGCGAGCGAAGCATACTCCTT
TACGTATGGAAAAAAAGGTGCTTTTACTTGGCCTTTTTGTGCTTGGAATGGCATTTGCAGAAGGAAGTGCGAATGATTGG
CTACCTATCGTGATGGTAGACGGACATCAGCAAAGTGTAGTGACAGGTTCTATTATGTACACTATTTTTGTATTGGCAAT
GACATTGGCTCGAATGTGCAGTAGTTATTTTCTTGATCGATTCGGTCGTGTCGCTGTCGTACGTGCTACTATTATGATGG
CTATTATAGGAATGACAATTGTCATATTTGGGAGTAACTCATATTTTCTAGCGCTTGGTGTAGTACTGTGGGGGATTGGT
GCCGCACTAGGTTTCCCAATTGGTCTTTCTGCTGCTGGAGATAGCGGCGAAAATGCGACTTCTAATGTTGCGACAGTTTC
TATAATCGGTTTTACAGCGTTTTTAGTCGGACCACCATTTTTAGGGATACTTGGAGAAGCATTCGGAATACGTAATGCTT
TGCTAGCAGTTTTATTATTTGTTATCTTGTCTGGAATTGTATCGTCTGTTACGAGAGAGAATACATCGAGTTAA

Upstream 100 bases:

>100_bases
TTGGTGGTAATCCAGCTAAAGTTATTAAAACGATAGAAGAATAAAAAGTGTTTTCATTAGAGTATAAATTATCGTATAGA
CAATTTGAAAGGTGTTTCAT

Downstream 100 bases:

>100_bases
ATACGGAGTGCCGCTAGTAGAAATATATCATCTCTATTGCTTTAGAAAACGATGTATGATATATTGTCAACGCAACTTAT
TAAAAGTGTTTAATAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKKDFTENDTKTLLASRNALFLLFALPGVAFATWISRTAAARDILAVSNAEMGWILFGLSVGSIIGLLSASHFIDGKGAR
DVIIGSMFFMIVGLLCLGITIYFVSSMGAFGSLLVFGVGYGLAEVALNVEGSSIEQKLGTTLLPKFHGFFSVGTLVGALS
GSAAISLHIPILYQFLAISVVFVLLVCRLYRFLPHGTGKKEKSRNKKRAKHTPLRMEKKVLLLGLFVLGMAFAEGSANDW
LPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSSYFLDRFGRVAVVRATIMMAIIGMTIVIFGSNSYFLALGVVLWGIG
AALGFPIGLSAAGDSGENATSNVATVSIIGFTAFLVGPPFLGILGEAFGIRNALLAVLLFVILSGIVSSVTRENTSS

Sequences:

>Translated_397_residues
MKKDFTENDTKTLLASRNALFLLFALPGVAFATWISRTAAARDILAVSNAEMGWILFGLSVGSIIGLLSASHFIDGKGAR
DVIIGSMFFMIVGLLCLGITIYFVSSMGAFGSLLVFGVGYGLAEVALNVEGSSIEQKLGTTLLPKFHGFFSVGTLVGALS
GSAAISLHIPILYQFLAISVVFVLLVCRLYRFLPHGTGKKEKSRNKKRAKHTPLRMEKKVLLLGLFVLGMAFAEGSANDW
LPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSSYFLDRFGRVAVVRATIMMAIIGMTIVIFGSNSYFLALGVVLWGIG
AALGFPIGLSAAGDSGENATSNVATVSIIGFTAFLVGPPFLGILGEAFGIRNALLAVLLFVILSGIVSSVTRENTSS
>Mature_397_residues
MKKDFTENDTKTLLASRNALFLLFALPGVAFATWISRTAAARDILAVSNAEMGWILFGLSVGSIIGLLSASHFIDGKGAR
DVIIGSMFFMIVGLLCLGITIYFVSSMGAFGSLLVFGVGYGLAEVALNVEGSSIEQKLGTTLLPKFHGFFSVGTLVGALS
GSAAISLHIPILYQFLAISVVFVLLVCRLYRFLPHGTGKKEKSRNKKRAKHTPLRMEKKVLLLGLFVLGMAFAEGSANDW
LPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSSYFLDRFGRVAVVRATIMMAIIGMTIVIFGSNSYFLALGVVLWGIG
AALGFPIGLSAAGDSGENATSNVATVSIIGFTAFLVGPPFLGILGEAFGIRNALLAVLLFVILSGIVSSVTRENTSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787068, Length=379, Percent_Identity=44.3271767810026, Blast_Score=319, Evalue=2e-88,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42166; Mature: 42166

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDFTENDTKTLLASRNALFLLFALPGVAFATWISRTAAARDILAVSNAEMGWILFGLS
CCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHH
VGSIIGLLSASHFIDGKGARDVIIGSMFFMIVGLLCLGITIYFVSSMGAFGSLLVFGVGY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAEVALNVEGSSIEQKLGTTLLPKFHGFFSVGTLVGALSGSAAISLHIPILYQFLAISV
HHHHHEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
VFVLLVCRLYRFLPHGTGKKEKSRNKKRAKHTPLRMEKKVLLLGLFVLGMAFAEGSANDW
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
LPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSSYFLDRFGRVAVVRATIMMAIIGMTI
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHE
VIFGSNSYFLALGVVLWGIGAALGFPIGLSAAGDSGENATSNVATVSIIGFTAFLVGPPF
EEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHCCHH
LGILGEAFGIRNALLAVLLFVILSGIVSSVTRENTSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKDFTENDTKTLLASRNALFLLFALPGVAFATWISRTAAARDILAVSNAEMGWILFGLS
CCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHH
VGSIIGLLSASHFIDGKGARDVIIGSMFFMIVGLLCLGITIYFVSSMGAFGSLLVFGVGY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAEVALNVEGSSIEQKLGTTLLPKFHGFFSVGTLVGALSGSAAISLHIPILYQFLAISV
HHHHHEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
VFVLLVCRLYRFLPHGTGKKEKSRNKKRAKHTPLRMEKKVLLLGLFVLGMAFAEGSANDW
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
LPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSSYFLDRFGRVAVVRATIMMAIIGMTI
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHE
VIFGSNSYFLALGVVLWGIGAALGFPIGLSAAGDSGENATSNVATVSIIGFTAFLVGPPF
EEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHCCHH
LGILGEAFGIRNALLAVLLFVILSGIVSSVTRENTSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]