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The map label for this gene is nylB [H]

Identifier: 218904439

GI number: 218904439

Start: 3171343

End: 3172602

Strand: Direct

Name: nylB [H]

Synonym: BCAH820_3323

Alternate gene names: 218904439

Gene position: 3171343-3172602 (Clockwise)

Preceding gene: 218904438

Following gene: 218904444

Centisome position: 59.81

GC content: 36.59

Gene sequence:

>1260_bases
ATGAAACTAAAAAAATCTCCCCTACTCTTACTCATAATCACATTCATATTTGTAATTACAGGGCTCGGTTTTACATACTT
CAAACATAATAAAACGACTCCATCAAAAAATAACGTGACGAAGAAAAATTGGTTAGATGACCCTTACTTACGTTGGTCAT
ACACACATATGAAAGAATTTACTTTAATTAATGATGTAAAAAACAATCCTGATCAAATTGCTCGCTTCCCATCCACATTG
CAAAACTTAGATGATTTTGCCGTGCAGCGTAGATTTGGAAGTGCAACTCCTCTAAAAGAACTTTTAGACGATAACAAAAC
AGATGCGTTTGTCGTTGTACATAATGGACAACTTGTTTATGAACGATATTTCAATGGCTATAACGAGAGCGAACCGCATG
GTATGGCGTCATTAGCAAAGGTATTTACCGGAGCAATAATACAATCTCTCGCTGAAGAAAACCGTATTGACTTAGAAAAA
ACGGCTGACACATATATAAAAGAATTAAAAAATACACCATTTGAAAAAGCAACACTACAGCAATTAATGGACATGCAAGT
TTCAGTAGAATACCCTACTCACGGATACGAACATCCAGCGTTAGAAAATCAAGATGCACAACTATACTTGGCGAGCAATA
TTTTACCTCGAGGTAAAAATTACGATGGTCCAATGAAAATTTATGATATGTTACAAGAAGCAGAAGAAACTGCACCGCCT
GGTTCTGTCTTTTCTTACAATAACGGATCAACAGAAACACTCGCTTGGATTATTCGAACGATCACTGGTAAATCATTAGC
TGAAAATGTTAGCGAGCGCATATGGTCTCAAATTGGTATGGAAGAAAACGCGTATTACGTTACCGATGAAACAAAAATAG
AACAAGCGAGCGCTGGTTTAAATGCAACTGCTAGAGATATGGCTAGATTTGGACAATTACTATTAAACAACGGGGAATAT
AACGGAAAACAAATTCTACCTTCTTCTATTACTGAAGATATAAAACATGTGCAAGAAGGTGAACTTGCAATTGGCCCTGG
TGCTTCCATTTCTTATCATAATCAATGGTGGATTCCGCACAATGAACAAGGTGCTTTTGAAGTGTTAGGTAGTTACGGAC
AAACACTTTACATCGATCCGAAAGCAAATATGGTCATTGTCCACTTCTCTTCTAATGCTACGCCAAGTAATGAAATACAT
TCCGTTTACTCCAATATGTATATTGATATTGCACATCATTTGGAGAAGCTTCCACAGTAG

Upstream 100 bases:

>100_bases
CTTTTATAAGGAAAGTAAACTTCCCCGTTTACTTTCCTTATTTTGTATTTCTTTCAAGAGAAGCGTATACTTATAATAGA
AATAAAAAGGAGGGACCGCT

Downstream 100 bases:

>100_bases
TGGAAGCTTTTTCTTATTGTGGGTGTTTTTTGAATCCATTATTTTATTCTTGAAACATAAACTCACTCAACATACATAAT
ACAAGCCGATGCTTCCTTAC

Product: putative 6-aminohexanoate-dimer hydrolase

Products: NA

Alternate protein names: Nylon oligomers-degrading enzyme EII [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEFTLINDVKNNPDQIARFPSTL
QNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVYERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEK
TADTYIKELKNTPFEKATLQQLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRGKNYDGPMKIYDMLQEAEETAPP
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGLNATARDMARFGQLLLNNGEY
NGKQILPSSITEDIKHVQEGELAIGPGASISYHNQWWIPHNEQGAFEVLGSYGQTLYIDPKANMVIVHFSSNATPSNEIH
SVYSNMYIDIAHHLEKLPQ

Sequences:

>Translated_419_residues
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEFTLINDVKNNPDQIARFPSTL
QNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVYERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEK
TADTYIKELKNTPFEKATLQQLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRGKNYDGPMKIYDMLQEAEETAPP
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGLNATARDMARFGQLLLNNGEY
NGKQILPSSITEDIKHVQEGELAIGPGASISYHNQWWIPHNEQGAFEVLGSYGQTLYIDPKANMVIVHFSSNATPSNEIH
SVYSNMYIDIAHHLEKLPQ
>Mature_419_residues
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEFTLINDVKNNPDQIARFPSTL
QNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVYERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEK
TADTYIKELKNTPFEKATLQQLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRGKNYDGPMKIYDMLQEAEETAPP
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGLNATARDMARFGQLLLNNGEY
NGKQILPSSITEDIKHVQEGELAIGPGASISYHNQWWIPHNEQGAFEVLGSYGQTLYIDPKANMVIVHFSSNATPSNEIH
SVYSNMYIDIAHHLEKLPQ

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.1.46 [H]

Molecular weight: Translated: 47490; Mature: 47490

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEF
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHCCCCCCEEEEHHHHHHH
TLINDVKNNPDQIARFPSTLQNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCEEEE
ERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEKTADTYIKELKNTPFEKATLQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHH
QLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRGKNYDGPMKIYDMLQEAEETAPP
HHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGL
CCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCC
NATARDMARFGQLLLNNGEYNGKQILPSSITEDIKHVQEGELAIGPGASISYHNQWWIPH
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCEECCCC
NEQGAFEVLGSYGQTLYIDPKANMVIVHFSSNATPSNEIHSVYSNMYIDIAHHLEKLPQ
CCCCHHHHHHCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEF
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHCCCCCCEEEEHHHHHHH
TLINDVKNNPDQIARFPSTLQNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCEEEE
ERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEKTADTYIKELKNTPFEKATLQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHH
QLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRGKNYDGPMKIYDMLQEAEETAPP
HHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGL
CCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCC
NATARDMARFGQLLLNNGEYNGKQILPSSITEDIKHVQEGELAIGPGASISYHNQWWIPH
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCEECCCC
NEQGAFEVLGSYGQTLYIDPKANMVIVHFSSNATPSNEIHSVYSNMYIDIAHHLEKLPQ
CCCCHHHHHHCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6646204; 6389532; 2512123 [H]