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The map label for this gene is sdaAA1 [H]

Identifier: 218904403

GI number: 218904403

Start: 3131537

End: 3132427

Strand: Reverse

Name: sdaAA1 [H]

Synonym: BCAH820_3287

Alternate gene names: 218904403

Gene position: 3132427-3131537 (Counterclockwise)

Preceding gene: 218904404

Following gene: 218904402

Centisome position: 59.07

GC content: 40.07

Gene sequence:

>891_bases
ATGTATATGGCCATAAAAGAAATTGTGGATGCAGCTAATAAAAGTCAAAAGACAATTTATGAATTAGCAATTGAACAGGA
AATCGAACAAACTAAAACTTCTTATGAAGAAGTTTGGAGTAAAATGGAACAAAATTTAGCGACTATGCAAAATGCTATAA
ATAAAAGTATCGAGGGCGACGGTGTATTTTCTCCAACCGGTTTAACCGGAGGTGATGCAGTTAAAATTAAAAACTATCGA
GAAAATAGGAAAACTCTTTCTGGAGATTTGATGGTGTTAGGGATTCAAAGTGCTATCGGTGTTAATGAAGTAAATGCTGC
ATTAGGAGCTATTTGTGCAACTCCAACAGCGGGTGCGAGTGGGACGATTCCGGGAGTCCTATTTAGTATTAAGGATACGT
TGCAGTTAATTCATGAAGATATGATACATTTTCTATTCACATCAGCGTTATTTGGAACGATAGTAGCAAACAACGCTTGT
ATTTCAGGAGCGTATGGAGGATGTCAAGCTGAAGTAGGCAGTGCCTCAGCAATGGCGGCTGCAGCTGCGGTAGAAGCTGC
AGGTGGAACGCCACAGCAATCTTCTGAAGCTTTTTCGATTGCATTACAAAATTTACTCGGTTTAGTTTGTGATCCGGTCG
CTGGTTTGGTAGAAATTCCTTGTGTAAAGAGAAACGCCATTGGAGCGACAAATGCTTTAGCAGCAGCGGACATCGCATTA
GCCGGCGTAAACAATATCATCAATGCTGACGAAGTTATTGAAGCGATGTATAGAGTTGGAAGACAGATTCCTCGCGAATT
AAGAGAGACAGGTTTAGGTGGAATTGCGGCTACACCTACAGGGATTGCCATTAAAAATAAAATATTTGGGGAGAAACAAT
CAAATCAATGA

Upstream 100 bases:

>100_bases
TTGGATTCGCTATTGCCTGGTAATGCTCAGAAGGAGTTAGGGAATTTAAGCAATATAGCTAATCTTATTATTCTTTAGTT
ACATTAAGGAGAGAAAAAAT

Downstream 100 bases:

>100_bases
ACAGTTAATGTCTATATTGTGAAAAGGTTAACAATCTATTCTCTATTATTCGCTTAAGGATTTCTGGATATTGGGGGAAT
TATCAATAAAATATCCTACT

Product: L-serine dehydratase, iron-sulfur-dependent, alpha subunit

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MYMAIKEIVDAANKSQKTIYELAIEQEIEQTKTSYEEVWSKMEQNLATMQNAINKSIEGDGVFSPTGLTGGDAVKIKNYR
ENRKTLSGDLMVLGIQSAIGVNEVNAALGAICATPTAGASGTIPGVLFSIKDTLQLIHEDMIHFLFTSALFGTIVANNAC
ISGAYGGCQAEVGSASAMAAAAAVEAAGGTPQQSSEAFSIALQNLLGLVCDPVAGLVEIPCVKRNAIGATNALAAADIAL
AGVNNIINADEVIEAMYRVGRQIPRELRETGLGGIAATPTGIAIKNKIFGEKQSNQ

Sequences:

>Translated_296_residues
MYMAIKEIVDAANKSQKTIYELAIEQEIEQTKTSYEEVWSKMEQNLATMQNAINKSIEGDGVFSPTGLTGGDAVKIKNYR
ENRKTLSGDLMVLGIQSAIGVNEVNAALGAICATPTAGASGTIPGVLFSIKDTLQLIHEDMIHFLFTSALFGTIVANNAC
ISGAYGGCQAEVGSASAMAAAAAVEAAGGTPQQSSEAFSIALQNLLGLVCDPVAGLVEIPCVKRNAIGATNALAAADIAL
AGVNNIINADEVIEAMYRVGRQIPRELRETGLGGIAATPTGIAIKNKIFGEKQSNQ
>Mature_296_residues
MYMAIKEIVDAANKSQKTIYELAIEQEIEQTKTSYEEVWSKMEQNLATMQNAINKSIEGDGVFSPTGLTGGDAVKIKNYR
ENRKTLSGDLMVLGIQSAIGVNEVNAALGAICATPTAGASGTIPGVLFSIKDTLQLIHEDMIHFLFTSALFGTIVANNAC
ISGAYGGCQAEVGSASAMAAAAAVEAAGGTPQQSSEAFSIALQNLLGLVCDPVAGLVEIPCVKRNAIGATNALAAADIAL
AGVNNIINADEVIEAMYRVGRQIPRELRETGLGGIAATPTGIAIKNKIFGEKQSNQ

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-sulfur dependent L-serine dehydratase family [H]

Homologues:

Organism=Escherichia coli, GI1788116, Length=281, Percent_Identity=34.8754448398576, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI48994925, Length=261, Percent_Identity=35.632183908046, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1789161, Length=245, Percent_Identity=36.734693877551, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR004642 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 30838; Mature: 30838

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMAIKEIVDAANKSQKTIYELAIEQEIEQTKTSYEEVWSKMEQNLATMQNAINKSIEGD
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVFSPTGLTGGDAVKIKNYRENRKTLSGDLMVLGIQSAIGVNEVNAALGAICATPTAGAS
CCCCCCCCCCCCEEEECCHHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHCCCCCCCC
GTIPGVLFSIKDTLQLIHEDMIHFLFTSALFGTIVANNACISGAYGGCQAEVGSASAMAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHH
AAAVEAAGGTPQQSSEAFSIALQNLLGLVCDPVAGLVEIPCVKRNAIGATNALAAADIAL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AGVNNIINADEVIEAMYRVGRQIPRELRETGLGGIAATPTGIAIKNKIFGEKQSNQ
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYMAIKEIVDAANKSQKTIYELAIEQEIEQTKTSYEEVWSKMEQNLATMQNAINKSIEGD
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVFSPTGLTGGDAVKIKNYRENRKTLSGDLMVLGIQSAIGVNEVNAALGAICATPTAGAS
CCCCCCCCCCCCEEEECCHHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHCCCCCCCC
GTIPGVLFSIKDTLQLIHEDMIHFLFTSALFGTIVANNACISGAYGGCQAEVGSASAMAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHH
AAAVEAAGGTPQQSSEAFSIALQNLLGLVCDPVAGLVEIPCVKRNAIGATNALAAADIAL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AGVNNIINADEVIEAMYRVGRQIPRELRETGLGGIAATPTGIAIKNKIFGEKQSNQ
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]