Click here to switch to the map view.

The map label for this gene is flp [H]

Identifier: 218904359

GI number: 218904359

Start: 3083641

End: 3085182

Strand: Reverse

Name: flp [H]

Synonym: BCAH820_3243

Alternate gene names: 218904359

Gene position: 3085182-3083641 (Counterclockwise)

Preceding gene: 218904360

Following gene: 218904358

Centisome position: 58.18

GC content: 35.34

Gene sequence:

>1542_bases
ATGAAGAATAGACAAAAAGCATCGATAATATGCAAAAGCATTTTATGTTTAATCATTTGCATATTGATTACGAATGGAGC
ATGGTTTACAAATGTGGTGAGGGCAGAATCGGGCATGCTGACTGATAGGAGTATAGAGGATTTCAAAAAAAAGCTGGATG
AACAGGTACCAAAATGGCAGGGGGATTATGAGGTACCGGGGGTTGCAATAGGAATTGTGCATGAGGGACGTATTGCTTAT
ACACTTAACTACGGTTATGTAGATAAAAAGGCAAAAAAAGCGGTGAGTGATGATACTTTGTTTCAGGCTGGTTCCATTTC
TAAAAACCTTACAGCGTGGGGAATCTTGCATCTTGTAGATGAAGGACGTTTATTACCAGATGATCCCGTTGGAAAATATC
TGACCAAATGGAAATTACCTAATTCAGAGTTTAATAATAATGAAGTAACCATAAGAAGATTGTTAAGTCATACAGCAGGA
CTATCTGCACATAAAGGATACCTCGGGGTTGCACCAGGGAAACATCTTGACTCTATTGAGGAGTCTCTGTCTGGAAAAGG
ATGGCTTAATGAAGCAGTGGAGGTTACCAATAAACCAGGTTCAGAAACAATTTACTCTGGTGGCGGATATACAATTTTAC
AACTTGTAATTGAAGAGGTTACCGGAATACCGTTTGATCGTTATATGGAAGAACAAATTATGAAACCTTTAGGAATGAAA
TCTAGTTCATTTTTACAACGTCCTGAAAACCATAACCTTTCAAAAGCTTATGGATATTTTGGAGAGGAGCTCCCTAGTTA
CCAATTTACCGAACAGGCTGCTGCAGGTCTTAAGACAAATGTTACCGATATGATGACATTGATACTTGCAAGCATGGATA
CAAATAATAAAGGGAATGGTGTCATCAAAAGTGAACGTGTTGAGGAAATGCAAAAGCCGATATTAGGGGAGAATGGTTTA
GGTATATTTGAAAAAAAATTATCTAATCAATGGAAATTACTTTATCATTCTGGTGACAATCGAGGCTGGCATTCTTTTTA
TGGTTTTATTCCTAATACAAAGGATGGATTGGTAATCCTTACAAATGGTGAAGGTGGTATAGACTTACGACAGGATATTT
ACCACGCATGGATTGAATATGAAACGGGAAAATTACCTGAAAGTTACTTTTCTCTAGCAGAGCAGAGAAAAACTAACTTC
ATTACATCAATTGTTATTGGGGCCACACTTAGTATATATTTGCTACTATTTGTGATTAGATTGTACAAAGGTAGAAGAAC
TTTCATTTTTAAGCAAGAGAAGAAATCTTACATCGGATTAGTAGTTAGGACATTTTTACTTGTTGTTACTGCTGTTCTCA
TTTTTTGTGCTGCTTATTTGTGGAGAGTTTTTAGTTTGAATTCCGGTAATACAATAAATTTCATTCTAATAATGGCATGG
ATTATAACGCTATTAATTAGTGGATTTTTCCCGAAAATTAAAAGTAATAAAAAACAACGTATGAAACGAAAAAAATTAAC
ATCAAAATTTACATGTATGTAA

Upstream 100 bases:

>100_bases
CAATTTTGTAAGGTTAAGTAATAAAAATCGATAGAACGGGATATTGGAATGGGATACTCTGATTGATGGGTAGAATATTC
TGAAAAAAGGGGTAGAACAA

Downstream 100 bases:

>100_bases
TGTTAAAGGCTAGAAAGCTAGATTGGCGTGAATCACTAATTGTGGAGTGCAAAAAACAACAAAATCTTTTAAAAAACACT
TAATTTTTTACTCCATCTAT

Product: beta-lactamase family protein

Products: NA

Alternate protein names: FmtA-like protein [H]

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MKNRQKASIICKSILCLIICILITNGAWFTNVVRAESGMLTDRSIEDFKKKLDEQVPKWQGDYEVPGVAIGIVHEGRIAY
TLNYGYVDKKAKKAVSDDTLFQAGSISKNLTAWGILHLVDEGRLLPDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAG
LSAHKGYLGVAPGKHLDSIEESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGLKTNVTDMMTLILASMDTNNKGNGVIKSERVEEMQKPILGENGL
GIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVILTNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNF
ITSIVIGATLSIYLLLFVIRLYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM

Sequences:

>Translated_513_residues
MKNRQKASIICKSILCLIICILITNGAWFTNVVRAESGMLTDRSIEDFKKKLDEQVPKWQGDYEVPGVAIGIVHEGRIAY
TLNYGYVDKKAKKAVSDDTLFQAGSISKNLTAWGILHLVDEGRLLPDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAG
LSAHKGYLGVAPGKHLDSIEESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGLKTNVTDMMTLILASMDTNNKGNGVIKSERVEEMQKPILGENGL
GIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVILTNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNF
ITSIVIGATLSIYLLLFVIRLYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM
>Mature_513_residues
MKNRQKASIICKSILCLIICILITNGAWFTNVVRAESGMLTDRSIEDFKKKLDEQVPKWQGDYEVPGVAIGIVHEGRIAY
TLNYGYVDKKAKKAVSDDTLFQAGSISKNLTAWGILHLVDEGRLLPDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAG
LSAHKGYLGVAPGKHLDSIEESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGLKTNVTDMMTLILASMDTNNKGNGVIKSERVEEMQKPILGENGL
GIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVILTNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNF
ITSIVIGATLSIYLLLFVIRLYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM

Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=233, Percent_Identity=31.7596566523605, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1790593, Length=245, Percent_Identity=24.4897959183673, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115533026, Length=384, Percent_Identity=26.0416666666667, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17550934, Length=200, Percent_Identity=29, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 57891; Mature: 57891

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRQKASIICKSILCLIICILITNGAWFTNVVRAESGMLTDRSIEDFKKKLDEQVPKWQ
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
GDYEVPGVAIGIVHEGRIAYTLNYGYVDKKAKKAVSDDTLFQAGSISKNLTAWGILHLVD
CCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHC
EGRLLPDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAGLSAHKGYLGVAPGKHLDSIE
CCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHH
ESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
HHHCCCCCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGLKTNVTDMMTLILASMDTNNKGNG
CHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
VIKSERVEEMQKPILGENGLGIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVIL
CCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCCCCCCEEEE
TNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNFITSIVIGATLSIYLLLFVIR
ECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
HHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM
HHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNRQKASIICKSILCLIICILITNGAWFTNVVRAESGMLTDRSIEDFKKKLDEQVPKWQ
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
GDYEVPGVAIGIVHEGRIAYTLNYGYVDKKAKKAVSDDTLFQAGSISKNLTAWGILHLVD
CCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHC
EGRLLPDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAGLSAHKGYLGVAPGKHLDSIE
CCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHH
ESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
HHHCCCCCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGLKTNVTDMMTLILASMDTNNKGNG
CHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
VIKSERVEEMQKPILGENGLGIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVIL
CCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCCCCCCEEEE
TNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNFITSIVIGATLSIYLLLFVIR
ECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
HHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM
HHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA