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The map label for this gene is ytaB [H]

Identifier: 218904302

GI number: 218904302

Start: 3024317

End: 3024772

Strand: Reverse

Name: ytaB [H]

Synonym: BCAH820_3186

Alternate gene names: 218904302

Gene position: 3024772-3024317 (Counterclockwise)

Preceding gene: 218904303

Following gene: 218904301

Centisome position: 57.04

GC content: 29.39

Gene sequence:

>456_bases
ATGAAAAAATCTAGTATCATAGTATTTTTACTAACATATGGTTTGTTTTATGTTTCTAGTATTTTATTTCCTATTGATCG
TATGTGGTACGATGCGCTAGAAAAGCCGTCTTGGACACCTTCTGGCATGACAATTGAAATGATTTGGGCTATATTATATG
GACTGATTGCATTATCAGTTACAATTATTTATAACAAATATGGATGGAAGCCAAAAACATTTTGGTTTGTATTCCTTTTA
AATTACATATGCAATCAAGCGTTTAGCTATTTTCAATTCAGTCAAAAAAATTTATTTTTAGCAACAGTAGATTGTTTACT
AGTCGCTATTACTACGTTGCTTCTCATAGCGGTTTCTTCCAAATTATCTAAAGTATCGACATGGTTGCTAATTCCATATT
TTTTATGGTCTACATTTGCTACATATTTATCTTGGACAATTTATAGTATAAATTAA

Upstream 100 bases:

>100_bases
AATATGTATTTGGAATTTAAATATTAGAATTTTATCCATTACAAGGACATACTAATCATATAAAGTTTCTAAAACCTTCT
ATTGAAAAAGGAGAATGTTT

Downstream 100 bases:

>100_bases
AGACGTATATGAAAACTTGAGCACAATAAAAATGCTCGAGTTTTTATGTTTATTAATGGTAATCTAAAATATAGAATATA
TACATCTTAGGGAGGGCATA

Product: TspO/MBR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKKSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIEMIWAILYGLIALSVTIIYNKYGWKPKTFWFVFLL
NYICNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIAVSSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN

Sequences:

>Translated_151_residues
MKKSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIEMIWAILYGLIALSVTIIYNKYGWKPKTFWFVFLL
NYICNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIAVSSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN
>Mature_151_residues
MKKSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIEMIWAILYGLIALSVTIIYNKYGWKPKTFWFVFLL
NYICNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIAVSSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004307 [H]

Pfam domain/function: PF03073 TspO_MBR [H]

EC number: NA

Molecular weight: Translated: 17650; Mature: 17650

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIEMIWAILYGLIALSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
TIIYNKYGWKPKTFWFVFLLNYICNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIAVSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLSKVSTWLLIPYFLWSTFATYLSWTIYSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MKKSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIEMIWAILYGLIALSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
TIIYNKYGWKPKTFWFVFLLNYICNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIAVSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLSKVSTWLLIPYFLWSTFATYLSWTIYSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]