Click here to switch to the map view.

The map label for this gene is ytcJ [H]

Identifier: 218904293

GI number: 218904293

Start: 3015429

End: 3017264

Strand: Direct

Name: ytcJ [H]

Synonym: BCAH820_3177

Alternate gene names: 218904293

Gene position: 3015429-3017264 (Clockwise)

Preceding gene: 218904292

Following gene: 218904300

Centisome position: 56.87

GC content: 40.25

Gene sequence:

>1836_bases
ATGAATGTACCGGATATGATCTTATATAACGGAAAAATCACTACTCTTGATCCCTCTCAACCTGAGGTATCTGCTATCGC
CATAACTGATGGTTTAATAACTGCAGTAGGTGGAGATGAGCTTCTTAATAGTGCCACAGAAAAAACAAAAAAAATAGACC
TTAAAAGAAAAAGAGCTATTCCAGGCCTGAATGACTCTCATATACACGTTATTCGTGGCGGTCTTCATTATAATATGGAA
TTACGATGGGAAGGTGTGCCTTCAATTACCATTGCTCTCGAAATGCTCAAAGAGCAGGCAAGGCGTACACCTGCTCCTCA
GTGGGTAAGAGTAGTTGGAGGTTGGTCTGAATTTCAATTTAAAGAGAGACGGATGCCAACTTTGAAAGAGATTAATGCTG
CTTCTGAAGACACACCTGTCTTTGTGCTACATCTTTACGATAGAGCACTTGTAAATCGTGCAGGGCTGCGTGCACTCGGA
TACACAAAAGATACCCCAGACCCTCCAGGTTGTTTAATTGAGCGGGATAAACGAGGTAATCCAACGGGCCTTTTAATTGC
GAATCCTAACGCTTCTATTCTTTATTCAAGTTTGGGTAAAGCTCCAATACTTAATTTTGACGACCAGATTAACTCAACTC
GCCACTTTATGCGCGAATTAAATAGATTAGGTATTACAAGTGCCATTGACGCAGGTGGTGGTTTCCAAAATTATCCTGAT
GACTACAGAGTTGTTGAACATTTAGCCGAGAAGGAACAATTAACTTTGCGTATTGCTTATAATCTATTTACGCAAAATCC
TAATCATGAATATGAAGACTTTGCTTCATGGACAAAAATTGTTTCTCCAGGTCAAGGAAATGATAAGTATAAAATGAATG
GTGCCGGAGAAATGTTAGTATTCTCTGCAGCTGATTTTGAAAAATTTCAAATGCCACAGCCCGAACTAGCTACGATGATG
GAAGCTGACTTAAAGAAAGTAATTTCTCTATTGGTAGAAAACCGTTGGCCATTCCGTTTACATGCAACTTATGACGAGTC
AATCACACGTTTCTTAAATGTATTTGAGGAAGTCAACAAAGAAATTCCTTTTAATGGTCTACGATGGTGGTTTGACCATG
CAGAAACAATCTCAGATCGTAGTATGGAACGTGTTAAGGCTTTAAATGGCGGTATTGCCATCCAAGACCGCATGGCTTTT
CAAGGTGAATACTTTGTTGATTTATACGGAAAGGAAGCTGCAAAGCGTACTCCTCCGATTTATCGTATGTTAGACCTAGG
TATACCTGTTGGCGCCGGTAGTGATGCAACTAGGGTTTCCAGCTATAACCCTTGGGTTGCTCTTTACTGGATGGTTGCCG
GAAAAACCATTGGTGGGCTTTCCATATACGACGAAAAAAATAAACTTGATAGAAAAGTAGCCCTGGAATTATATTCAAAA
GGAAGTGCGTGGTTCTCTGGTGATGAAGGTAAAAAGGGAACCCTTGCAGTAGGTCAGTTTGCTGATATTGCTGTATTGTC
TGCTGACTACTTTACTGTGCCAGAAGAAGAAATTAAAGACCTTGAATCATTACTTACCATTATGGGCGGACAGGTTGTTT
ATGGAAATGATGAATTTAAAAATTTATCACCTGAATTGCCGCCAGCATCACCTGATTGGTCACCGACGGGAGTTTATGGT
TATGGTGGTGCTAACCTAGCCCACACTATTCTTTCTCACGATTCCCATGATAACAAGTTACATAGTTGCAGTAACCCTCT
CCATCAACATACTCATACCGTAATAGGAAAAGATGGAACTAAATGGGGTATTGGTTGTACTTGCTTTGCTTTCTAA

Upstream 100 bases:

>100_bases
GTATGTATAGTGTCCTTGCTATCATGGGTAGTTATGCCGATTTTCGGTAAATTATTTCATCCATGGTTACAAAATAATAG
GAAGTAGACGAGGTGTGAAT

Downstream 100 bases:

>100_bases
GTCAAAACCACCGGTATAATGCCGGTGGTTTTCTTTATGCAATAAGAATACAGCAGTATATCCCTAATGGAATCTATTAC
TATGCGATAAGACCGAAGAG

Product: amidohydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MNVPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRGGLHYNME
LRWEGVPSITIALEMLKEQARRTPAPQWVRVVGGWSEFQFKERRMPTLKEINAASEDTPVFVLHLYDRALVNRAGLRALG
YTKDTPDPPGCLIERDKRGNPTGLLIANPNASILYSSLGKAPILNFDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPD
DYRVVEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWTKIVSPGQGNDKYKMNGAGEMLVFSAADFEKFQMPQPELATMM
EADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNKEIPFNGLRWWFDHAETISDRSMERVKALNGGIAIQDRMAF
QGEYFVDLYGKEAAKRTPPIYRMLDLGIPVGAGSDATRVSSYNPWVALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSK
GSAWFSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESLLTIMGGQVVYGNDEFKNLSPELPPASPDWSPTGVYG
YGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGTKWGIGCTCFAF

Sequences:

>Translated_611_residues
MNVPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRGGLHYNME
LRWEGVPSITIALEMLKEQARRTPAPQWVRVVGGWSEFQFKERRMPTLKEINAASEDTPVFVLHLYDRALVNRAGLRALG
YTKDTPDPPGCLIERDKRGNPTGLLIANPNASILYSSLGKAPILNFDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPD
DYRVVEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWTKIVSPGQGNDKYKMNGAGEMLVFSAADFEKFQMPQPELATMM
EADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNKEIPFNGLRWWFDHAETISDRSMERVKALNGGIAIQDRMAF
QGEYFVDLYGKEAAKRTPPIYRMLDLGIPVGAGSDATRVSSYNPWVALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSK
GSAWFSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESLLTIMGGQVVYGNDEFKNLSPELPPASPDWSPTGVYG
YGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGTKWGIGCTCFAF
>Mature_611_residues
MNVPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRGGLHYNME
LRWEGVPSITIALEMLKEQARRTPAPQWVRVVGGWSEFQFKERRMPTLKEINAASEDTPVFVLHLYDRALVNRAGLRALG
YTKDTPDPPGCLIERDKRGNPTGLLIANPNASILYSSLGKAPILNFDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPD
DYRVVEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWTKIVSPGQGNDKYKMNGAGEMLVFSAADFEKFQMPQPELATMM
EADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNKEIPFNGLRWWFDHAETISDRSMERVKALNGGIAIQDRMAF
QGEYFVDLYGKEAAKRTPPIYRMLDLGIPVGAGSDATRVSSYNPWVALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSK
GSAWFSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESLLTIMGGQVVYGNDEFKNLSPELPPASPDWSPTGVYG
YGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGTKWGIGCTCFAF

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 68227; Mature: 68227

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAI
CCCCCEEEECCEEEEECCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCC
PGLNDSHIHVIRGGLHYNMELRWEGVPSITIALEMLKEQARRTPAPQWVRVVGGWSEFQF
CCCCCCEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHH
KERRMPTLKEINAASEDTPVFVLHLYDRALVNRAGLRALGYTKDTPDPPGCLIERDKRGN
HHHCCCHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCCEECCCCCCCCCCCCEEECCCCCC
PTGLLIANPNASILYSSLGKAPILNFDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPD
CCEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCH
DYRVVEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWTKIVSPGQGNDKYKMNGAGEMLV
HHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCEEE
FSAADFEKFQMPQPELATMMEADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNK
EECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
EIPFNGLRWWFDHAETISDRSMERVKALNGGIAIQDRMAFQGEYFVDLYGKEAAKRTPPI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCCEEEEECCCHHHHCCCCH
YRMLDLGIPVGAGSDATRVSSYNPWVALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSK
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHC
GSAWFSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESLLTIMGGQVVYGNDEFK
CCCEECCCCCCCCCEEECCCCCEEEEECCCEECCHHHHHHHHHHHHHHCCEEEECCCHHC
NLSPELPPASPDWSPTGVYGYGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGT
CCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHEEECCCCC
KWGIGCTCFAF
CCCCCEEEEEC
>Mature Secondary Structure
MNVPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAI
CCCCCEEEECCEEEEECCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCC
PGLNDSHIHVIRGGLHYNMELRWEGVPSITIALEMLKEQARRTPAPQWVRVVGGWSEFQF
CCCCCCEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHH
KERRMPTLKEINAASEDTPVFVLHLYDRALVNRAGLRALGYTKDTPDPPGCLIERDKRGN
HHHCCCHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCCEECCCCCCCCCCCCEEECCCCCC
PTGLLIANPNASILYSSLGKAPILNFDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPD
CCEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCH
DYRVVEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWTKIVSPGQGNDKYKMNGAGEMLV
HHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCEEE
FSAADFEKFQMPQPELATMMEADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNK
EECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
EIPFNGLRWWFDHAETISDRSMERVKALNGGIAIQDRMAFQGEYFVDLYGKEAAKRTPPI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCCEEEEECCCHHHHCCCCH
YRMLDLGIPVGAGSDATRVSSYNPWVALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSK
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHC
GSAWFSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESLLTIMGGQVVYGNDEFK
CCCEECCCCCCCCCEEECCCCCEEEEECCCEECCHHHHHHHHHHHHHHCCEEEECCCHHC
NLSPELPPASPDWSPTGVYGYGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGT
CCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHEEECCCCC
KWGIGCTCFAF
CCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]