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The map label for this gene is ycaC [H]

Identifier: 218904291

GI number: 218904291

Start: 3014181

End: 3014825

Strand: Direct

Name: ycaC [H]

Synonym: BCAH820_3175

Alternate gene names: 218904291

Gene position: 3014181-3014825 (Clockwise)

Preceding gene: 218904290

Following gene: 218904292

Centisome position: 56.84

GC content: 38.76

Gene sequence:

>645_bases
ATGAGTAATTTAGAATTGTTAAATCCGGAGAACAGTGCCTTAATTTTGATTGATTTTCAACCTCAAATGACTTTTGGAGT
TGCAAGTATTGATAGACAAACATTGATTAATAACGTTATGTTGCTTGCTAAATCAGCAAAAACTTTTAACGTACCTACTA
TTCTTACTACAGTTGAGACACGCAGCTTTTCTGGTTATTTTTGGCCACAAATTCTTGACATATTCCCAAACCATGAAATT
ATAGAACGCAGTTCAATGAACTCTTGGGAAGATCAAAAATTTGTTGAAGCAGTTAAAGCAACAGGTAGAAAGAAATTAAT
ATTTGCAGCACTTTGGACGGAAGTTTGCCTTGCATTCCCTGTGCTTGAAGCAATTAAAGCTGGCTATGAGGTGTATGCAG
TTGATGATGCTTCAGGTGGGACTAGTTTGACAGCACATAACGCTGCTATGCGTCGTGTAGAGCAAGCTGGTGCAATTCCA
GTTACAGCAATTCAAGTTTTACTTGAATACCAACGTGACTGGGCACACAAAGACACGTATGATGCTGTAATGGAGATTGT
AAAGGAACACACTGGTGCTTATGGTCAAGGTGTAGAATACGCATATACTATGGTGCATGGCGCGCTTCCAAGCAGGAAAA
TATGA

Upstream 100 bases:

>100_bases
CACTAATTTTAAATTAAAAAGTATAGCAGAGCTTCAATTAACAGAAGATACACTACTTTCAACAAATAATTATAAACAAT
TAAAAAAGGAGCCTTTTATT

Downstream 100 bases:

>100_bases
AACACGAAGGAGTAGCTGTCGAAGAGACTCATACAGAGAACACGATGGATGCTGTCGACCCAGTAACAACAATTGTTACA
TGGAAAATTCAACAAGGGAA

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSNLELLNPENSALILIDFQPQMTFGVASIDRQTLINNVMLLAKSAKTFNVPTILTTVETRSFSGYFWPQILDIFPNHEI
IERSSMNSWEDQKFVEAVKATGRKKLIFAALWTEVCLAFPVLEAIKAGYEVYAVDDASGGTSLTAHNAAMRRVEQAGAIP
VTAIQVLLEYQRDWAHKDTYDAVMEIVKEHTGAYGQGVEYAYTMVHGALPSRKI

Sequences:

>Translated_214_residues
MSNLELLNPENSALILIDFQPQMTFGVASIDRQTLINNVMLLAKSAKTFNVPTILTTVETRSFSGYFWPQILDIFPNHEI
IERSSMNSWEDQKFVEAVKATGRKKLIFAALWTEVCLAFPVLEAIKAGYEVYAVDDASGGTSLTAHNAAMRRVEQAGAIP
VTAIQVLLEYQRDWAHKDTYDAVMEIVKEHTGAYGQGVEYAYTMVHGALPSRKI
>Mature_213_residues
SNLELLNPENSALILIDFQPQMTFGVASIDRQTLINNVMLLAKSAKTFNVPTILTTVETRSFSGYFWPQILDIFPNHEII
ERSSMNSWEDQKFVEAVKATGRKKLIFAALWTEVCLAFPVLEAIKAGYEVYAVDDASGGTSLTAHNAAMRRVEQAGAIPV
TAIQVLLEYQRDWAHKDTYDAVMEIVKEHTGAYGQGVEYAYTMVHGALPSRKI

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=189, Percent_Identity=38.0952380952381, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23876; Mature: 23744

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLELLNPENSALILIDFQPQMTFGVASIDRQTLINNVMLLAKSAKTFNVPTILTTVET
CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
RSFSGYFWPQILDIFPNHEIIERSSMNSWEDQKFVEAVKATGRKKLIFAALWTEVCLAFP
CCCCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLEAIKAGYEVYAVDDASGGTSLTAHNAAMRRVEQAGAIPVTAIQVLLEYQRDWAHKDTY
HHHHHHCCCEEEEEECCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
DAVMEIVKEHTGAYGQGVEYAYTMVHGALPSRKI
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNLELLNPENSALILIDFQPQMTFGVASIDRQTLINNVMLLAKSAKTFNVPTILTTVET
CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
RSFSGYFWPQILDIFPNHEIIERSSMNSWEDQKFVEAVKATGRKKLIFAALWTEVCLAFP
CCCCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLEAIKAGYEVYAVDDASGGTSLTAHNAAMRRVEQAGAIPVTAIQVLLEYQRDWAHKDTY
HHHHHHCCCEEEEEECCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
DAVMEIVKEHTGAYGQGVEYAYTMVHGALPSRKI
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]