Click here to switch to the map view.

The map label for this gene is 218904234

Identifier: 218904234

GI number: 218904234

Start: 2950965

End: 2951582

Strand: Direct

Name: 218904234

Synonym: BCAH820_3118

Alternate gene names: NA

Gene position: 2950965-2951582 (Clockwise)

Preceding gene: 218904228

Following gene: 218904237

Centisome position: 55.65

GC content: 34.95

Gene sequence:

>618_bases
TTGCGCAATAGTAATTTAGATTTACGTGTTGTTCGTACGAAAACTGCCATACGAAATGCATTGGTGGAATTAATTGAAGA
AAAAGGTTTTGACGCCATTACAGTGAAAGATATTACAACGAAAGCAAACATTAATCGCGGTACTTTCTATGCGCACTATC
AAGATAAATTTGATTTAATGACAAAATGCCAAGAAGACATTATGTATGAGTTTTCTAGCATTGCCAAAAAGAGATTCCCA
GAAGTGATTGCGGATCTCGGATCGAATCCTTCTCCAACAATGCCGTTTCTACTTATCACTTCTATTCTTGAATTTCTAAA
TGAAAATAGTGATTTTATGAAAGCTGTATTAAGCCCAAAAGGAGATTTATCCTTTCAAACAAAGTTGAAAGACTTTATGT
GGAAAACATTATTTGAAGATACGAATGGTGCTCTCATTAATAAGGAAAATTTACTTGTTCCAAGCCAATACTTAACGTCT
TATATGGCATCCGCTCATATTGGTGTCATTCAGCAATGGTTAAATAGTGGCCAAAAAGAAACACCTGAGGAAATTGCTCG
TATTTTATCAACAATCGCAGTTCATGGACCTTTTTATGCAGCTGGCTTAAAGAAGTGA

Upstream 100 bases:

>100_bases
TGTTCGAGTTGAACCTTATACAATAATCAAAAATCGTGAATGTGTCGGTTATAAGACACATTCTTAAAATGTGTTGGCTA
AAATGAAGGAGGAACATGCT

Downstream 100 bases:

>100_bases
GTTATTGCAAAATAAAAAGATCATCCACTATTTATAGCGGATGATCTTTTACTTCATTACAACACTTCAATATACCCTTC
CGTTCCATGTACTCGTATTC

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Transcription Regulator; Regulatory Protein TetR; TetR Family HTH Transcriptional Regulator; Acrr-Type Transcriptional Regulator; Transcriptional Regulator Tetr Family; TetR Family Regulatory Protein Of MDR Cluster; Regulatory Protein TetR Family; Transcriptional Regulator TetR/AcrR Family Protein

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRNSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLMTKCQEDIMYEFSSIAKKRFP
EVIADLGSNPSPTMPFLLITSILEFLNENSDFMKAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALINKENLLVPSQYLTS
YMASAHIGVIQQWLNSGQKETPEEIARILSTIAVHGPFYAAGLKK

Sequences:

>Translated_205_residues
MRNSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLMTKCQEDIMYEFSSIAKKRFP
EVIADLGSNPSPTMPFLLITSILEFLNENSDFMKAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALINKENLLVPSQYLTS
YMASAHIGVIQQWLNSGQKETPEEIARILSTIAVHGPFYAAGLKK
>Mature_205_residues
MRNSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLMTKCQEDIMYEFSSIAKKRFP
EVIADLGSNPSPTMPFLLITSILEFLNENSDFMKAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALINKENLLVPSQYLTS
YMASAHIGVIQQWLNSGQKETPEEIARILSTIAVHGPFYAAGLKK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23223; Mature: 23223

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLM
CCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCEEEEEHHHHHHHH
TKCQEDIMYEFSSIAKKRFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMKAVLSPK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCC
GDLSFQTKLKDFMWKTLFEDTNGALINKENLLVPSQYLTSYMASAHIGVIQQWLNSGQKE
CCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TPEEIARILSTIAVHGPFYAAGLKK
CHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MRNSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLM
CCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCEEEEEHHHHHHHH
TKCQEDIMYEFSSIAKKRFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMKAVLSPK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCC
GDLSFQTKLKDFMWKTLFEDTNGALINKENLLVPSQYLTSYMASAHIGVIQQWLNSGQKE
CCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TPEEIARILSTIAVHGPFYAAGLKK
CHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA