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The map label for this gene is ybbI [C]

Identifier: 218904166

GI number: 218904166

Start: 2889879

End: 2890700

Strand: Reverse

Name: ybbI [C]

Synonym: BCAH820_3050

Alternate gene names: 218904166

Gene position: 2890700-2889879 (Counterclockwise)

Preceding gene: 218904167

Following gene: 218904165

Centisome position: 54.51

GC content: 28.83

Gene sequence:

>822_bases
ATGAAGAAATACAAAATAGGAGAAGTAGGAAAGGAATTTGGAGTTTCAATAGATGCTTTACGATTTTATGAAAAGAAAGG
ATTCCTAAAACCACAAAAAGATAAAGATAACGGTTTTAGATTTTATACATATGAGGATTTTGGGGTATTTTTAGCAATTA
GAAGTTTTCGACAAATGGGGTTTCATGTTAAGGAAATTGGATCGATTTTTAACGGTTTAGAATATGATGACATAATGAAA
AAATGTAATGATAAAATAGCTGAAAAAAATGAAGCGATAAAACAATTAGAATTAGAAACAAAACAAATAAATGAATTTAT
TAACTTATTAAAAGAATACAAGCAAGAAGATAAGCAATGGGTGATAAAACCAGCCGGCACTTATTATTTTCTCAAACATG
TTCATATAAATGATGGAGCGCTATGTGTAAATCCTCTATTAAAAGAATGGTTAAATTTCTTGCCAACTGTTTCAACAGCT
TTGTGTATTCCACTTGAAGAATATAAAGTGAAAAATATAGATAATAGTTACTGGGTAATGGCTATATCTGAATTAAAGAT
GAAAGAGTGCCAATTACCTATAGATGATTCAGTTTTTCAAATAGAAATGGGAGAGTGCTTGCATTACTTATATGAAAAAG
AGGTAAATGAACCATTATCTTCGTTAATATTAGATGAACCACTACATATTATACAGGAACAGGGATACTCTCTTAACGGA
GATATTTTATGTCGATACGTTTGTGAAACAAAGAATCAAGAAAATACAGTTGAACACTATATTATTATGATTCCTATTAT
TAAATCAAACAGTACAAAGTGA

Upstream 100 bases:

>100_bases
ATTCATACGAAATCTCTTTTTATTTTGTATATAATTGTTTTTCAAAACTTGTTACACTATAAAGGTATTTGTAGGAATTA
TAGATTTGAAGGTGATAGGT

Downstream 100 bases:

>100_bases
AAAAATGCATGTAAATGTTAGACAATGTCTACAGTTACATGCATTTTTTTTGAAATAAAAAGTTTTATTCGATGTTTATA
TAAAATAAGCTATTGACCCT

Product: transcriptional regulator, MerR family protein

Products: NA

Alternate protein names: MerR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKKYKIGEVGKEFGVSIDALRFYEKKGFLKPQKDKDNGFRFYTYEDFGVFLAIRSFRQMGFHVKEIGSIFNGLEYDDIMK
KCNDKIAEKNEAIKQLELETKQINEFINLLKEYKQEDKQWVIKPAGTYYFLKHVHINDGALCVNPLLKEWLNFLPTVSTA
LCIPLEEYKVKNIDNSYWVMAISELKMKECQLPIDDSVFQIEMGECLHYLYEKEVNEPLSSLILDEPLHIIQEQGYSLNG
DILCRYVCETKNQENTVEHYIIMIPIIKSNSTK

Sequences:

>Translated_273_residues
MKKYKIGEVGKEFGVSIDALRFYEKKGFLKPQKDKDNGFRFYTYEDFGVFLAIRSFRQMGFHVKEIGSIFNGLEYDDIMK
KCNDKIAEKNEAIKQLELETKQINEFINLLKEYKQEDKQWVIKPAGTYYFLKHVHINDGALCVNPLLKEWLNFLPTVSTA
LCIPLEEYKVKNIDNSYWVMAISELKMKECQLPIDDSVFQIEMGECLHYLYEKEVNEPLSSLILDEPLHIIQEQGYSLNG
DILCRYVCETKNQENTVEHYIIMIPIIKSNSTK
>Mature_273_residues
MKKYKIGEVGKEFGVSIDALRFYEKKGFLKPQKDKDNGFRFYTYEDFGVFLAIRSFRQMGFHVKEIGSIFNGLEYDDIMK
KCNDKIAEKNEAIKQLELETKQINEFINLLKEYKQEDKQWVIKPAGTYYFLKHVHINDGALCVNPLLKEWLNFLPTVSTA
LCIPLEEYKVKNIDNSYWVMAISELKMKECQLPIDDSVFQIEMGECLHYLYEKEVNEPLSSLILDEPLHIIQEQGYSLNG
DILCRYVCETKNQENTVEHYIIMIPIIKSNSTK

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786695, Length=108, Percent_Identity=30.5555555555556, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32003; Mature: 32003

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYKIGEVGKEFGVSIDALRFYEKKGFLKPQKDKDNGFRFYTYEDFGVFLAIRSFRQMG
CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHC
FHVKEIGSIFNGLEYDDIMKKCNDKIAEKNEAIKQLELETKQINEFINLLKEYKQEDKQW
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VIKPAGTYYFLKHVHINDGALCVNPLLKEWLNFLPTVSTALCIPLEEYKVKNIDNSYWVM
EEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHCCCCCCEEEE
AISELKMKECQLPIDDSVFQIEMGECLHYLYEKEVNEPLSSLILDEPLHIIQEQGYSLNG
EEHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DILCRYVCETKNQENTVEHYIIMIPIIKSNSTK
HHEEEEEHHCCCCCCCEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MKKYKIGEVGKEFGVSIDALRFYEKKGFLKPQKDKDNGFRFYTYEDFGVFLAIRSFRQMG
CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHC
FHVKEIGSIFNGLEYDDIMKKCNDKIAEKNEAIKQLELETKQINEFINLLKEYKQEDKQW
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VIKPAGTYYFLKHVHINDGALCVNPLLKEWLNFLPTVSTALCIPLEEYKVKNIDNSYWVM
EEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHCCCCCCEEEE
AISELKMKECQLPIDDSVFQIEMGECLHYLYEKEVNEPLSSLILDEPLHIIQEQGYSLNG
EEHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DILCRYVCETKNQENTVEHYIIMIPIIKSNSTK
HHEEEEEHHCCCCCCCEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA