Click here to switch to the map view.

The map label for this gene is ycdQ [C]

Identifier: 218904137

GI number: 218904137

Start: 2858195

End: 2859712

Strand: Reverse

Name: ycdQ [C]

Synonym: BCAH820_3021

Alternate gene names: 218904137

Gene position: 2859712-2858195 (Counterclockwise)

Preceding gene: 218904138

Following gene: 218904136

Centisome position: 53.93

GC content: 32.54

Gene sequence:

>1518_bases
ATGAAATCGTTAACGGTTATTATTTCGTATAGTGATCGAGAGCAACTAGTAGAAGAATTAATTAACGCTGCATGGAAACT
AAAACCAATTGAAATTATAATTTTAGCCCCTAATGATAAAAGTAAATTATATGAAATAGCAATGAAATATAGATGTCATA
GTGTTTTAATGAATAAATATAGTGCGCATTATCAAGGATATGAAGCTTGTATAAAGAAAGCGAAAGGAGAAATTTTATTA
TTTTTAGATAGCAATTTTTCATTATCCACAAATGAAATGCAGAGATTTATTGAGCCAATTGTTACAAATCAGGCCGATGT
AGTTTTAAATAAAATAGATAAATTGATAGAAATAGGTAAATGTCCAAACATGGACATTGTATGGAGAAAAATGTTAAATG
AAATTTTAAGACGACCAGATTTAAAAAGCAATTCAATACTTTCATTGCCATATGCGCTTACGAAGGAAGTGGTGGAAAAT
ATCGGCTTTGATTATATGAAAGATATCGTTTTATCTCATATGAAGATTGTGAATCAAGGCTGGCGGATTAACGACCAATA
TGCAATTAATACATTATCTAAAGATGAGACTATAGAGGAAGAAGGATATTTAATAAAAAAAGAGTTATCAAAAAATGAAA
AAGAGAAAGTAGAAAGATATTTAAGGGGTATATCTAAATGGATAGAGAAAAAAGGAAGCAGAGTAGGGTTTACTGATGCA
GGAAAAAGAAGGGATATTATTCAAAAGCTAGGTAAAGCCAAGCAATACCCTTCCTATCATCAAGGTTGGGGAATGCATTC
TTCAATTTATGACGGGAAGCAACTTTCTGTTATTATACCGGTGCAAAATGAAGAAGAAACTATAGAACAAGTAATACTCG
AGGCAAGAAAAATAGAACCGCTAGAAATAATTGTCGTTGTAAATGGTTCAACAGATCATACAGCTGATATAGCTAAAAGA
CTTGGTGCCACTATTATTAAATATAACGAACGACTTGGTCATAATGTTGGACGTGCTATCGGGGCGCTTGAAGCTACAGG
AGATATTCTCTTATTTATTGATGGTGATTTTAGTGTTTCAGGAAGTGATTTGCATCACTTTACAAAAGCGGTTTCAGATG
GCATAGACATAGCGTTAAATGATTTGAACCCAATGCTCAATCCGCCTTTTTATGTTGTTGATATTGTAAAATATATGCTT
AATTTAGCATATGGTCGTCCAGAATTAAGTAATGGCTCATTAGTAGCAATTCCACATGCAATGAGTAAATCATGCTTAGA
TGCAATAGGATGGGAAACTTTACTATGTCCTAGTCTTGCACAAGTAAAAGCTATATTACAAGGATATAGGGTAGAATGTG
TACATTATGTTGATGTTGTAAAACCGAATAGAATTCGTTTAAAGGAAAATGTAAGTCAAAATGGACATCCTCCAGCAGTA
TTAAGAATAATTGGTGATCATGTTGAAGCGCTCTCTTATTTGATAGAACAACTCGAAATGGATGGAAAGGGTGATTAA

Upstream 100 bases:

>100_bases
AATAAAGTAGCAAATTTAGAGTGAATTGTACTACTTAATATTTTAAATTCATATGAATGATGTTTCATGCCACATGATGT
GTAAAAAAGGGGGGATTGTA

Downstream 100 bases:

>100_bases
ACTGTTAGACCAGTATAAAATAATTAACATTTCATATGAACAATTATGGCAAATGGATTTTCAAACTACGGAGCCATTTA
TACTCAAGGTTGATTGGGAT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase/Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MKSLTVIISYSDREQLVEELINAAWKLKPIEIIILAPNDKSKLYEIAMKYRCHSVLMNKYSAHYQGYEACIKKAKGEILL
FLDSNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGKCPNMDIVWRKMLNEILRRPDLKSNSILSLPYALTKEVVEN
IGFDYMKDIVLSHMKIVNQGWRINDQYAINTLSKDETIEEEGYLIKKELSKNEKEKVERYLRGISKWIEKKGSRVGFTDA
GKRRDIIQKLGKAKQYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEPLEIIVVVNGSTDHTADIAKR
LGATIIKYNERLGHNVGRAIGALEATGDILLFIDGDFSVSGSDLHHFTKAVSDGIDIALNDLNPMLNPPFYVVDIVKYML
NLAYGRPELSNGSLVAIPHAMSKSCLDAIGWETLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLKENVSQNGHPPAV
LRIIGDHVEALSYLIEQLEMDGKGD

Sequences:

>Translated_505_residues
MKSLTVIISYSDREQLVEELINAAWKLKPIEIIILAPNDKSKLYEIAMKYRCHSVLMNKYSAHYQGYEACIKKAKGEILL
FLDSNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGKCPNMDIVWRKMLNEILRRPDLKSNSILSLPYALTKEVVEN
IGFDYMKDIVLSHMKIVNQGWRINDQYAINTLSKDETIEEEGYLIKKELSKNEKEKVERYLRGISKWIEKKGSRVGFTDA
GKRRDIIQKLGKAKQYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEPLEIIVVVNGSTDHTADIAKR
LGATIIKYNERLGHNVGRAIGALEATGDILLFIDGDFSVSGSDLHHFTKAVSDGIDIALNDLNPMLNPPFYVVDIVKYML
NLAYGRPELSNGSLVAIPHAMSKSCLDAIGWETLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLKENVSQNGHPPAV
LRIIGDHVEALSYLIEQLEMDGKGD
>Mature_505_residues
MKSLTVIISYSDREQLVEELINAAWKLKPIEIIILAPNDKSKLYEIAMKYRCHSVLMNKYSAHYQGYEACIKKAKGEILL
FLDSNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGKCPNMDIVWRKMLNEILRRPDLKSNSILSLPYALTKEVVEN
IGFDYMKDIVLSHMKIVNQGWRINDQYAINTLSKDETIEEEGYLIKKELSKNEKEKVERYLRGISKWIEKKGSRVGFTDA
GKRRDIIQKLGKAKQYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEPLEIIVVVNGSTDHTADIAKR
LGATIIKYNERLGHNVGRAIGALEATGDILLFIDGDFSVSGSDLHHFTKAVSDGIDIALNDLNPMLNPPFYVVDIVKYML
NLAYGRPELSNGSLVAIPHAMSKSCLDAIGWETLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLKENVSQNGHPPAV
LRIIGDHVEALSYLIEQLEMDGKGD

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57138; Mature: 57138

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTVIISYSDREQLVEELINAAWKLKPIEIIILAPNDKSKLYEIAMKYRCHSVLMNKY
CCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SAHYQGYEACIKKAKGEILLFLDSNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGK
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
CPNMDIVWRKMLNEILRRPDLKSNSILSLPYALTKEVVENIGFDYMKDIVLSHMKIVNQG
CCCCHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
WRINDQYAINTLSKDETIEEEGYLIKKELSKNEKEKVERYLRGISKWIEKKGSRVGFTDA
CCCCCCCEEEECCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GKRRDIIQKLGKAKQYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEP
CHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
LEIIVVVNGSTDHTADIAKRLGATIIKYNERLGHNVGRAIGALEATGDILLFIDGDFSVS
EEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEECCCCCCC
GSDLHHFTKAVSDGIDIALNDLNPMLNPPFYVVDIVKYMLNLAYGRPELSNGSLVAIPHA
CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCH
MSKSCLDAIGWETLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLKENVSQNGHPPAV
HHHHHHHHHCCHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEHHCCCCCCCCHHH
LRIIGDHVEALSYLIEQLEMDGKGD
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKSLTVIISYSDREQLVEELINAAWKLKPIEIIILAPNDKSKLYEIAMKYRCHSVLMNKY
CCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SAHYQGYEACIKKAKGEILLFLDSNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGK
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
CPNMDIVWRKMLNEILRRPDLKSNSILSLPYALTKEVVENIGFDYMKDIVLSHMKIVNQG
CCCCHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
WRINDQYAINTLSKDETIEEEGYLIKKELSKNEKEKVERYLRGISKWIEKKGSRVGFTDA
CCCCCCCEEEECCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GKRRDIIQKLGKAKQYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEP
CHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
LEIIVVVNGSTDHTADIAKRLGATIIKYNERLGHNVGRAIGALEATGDILLFIDGDFSVS
EEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEECCCCCCC
GSDLHHFTKAVSDGIDIALNDLNPMLNPPFYVVDIVKYMLNLAYGRPELSNGSLVAIPHA
CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCH
MSKSCLDAIGWETLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLKENVSQNGHPPAV
HHHHHHHHHCCHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEHHCCCCCCCCHHH
LRIIGDHVEALSYLIEQLEMDGKGD
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA