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The map label for this gene is ytrB [H]

Identifier: 218904023

GI number: 218904023

Start: 2749803

End: 2750675

Strand: Reverse

Name: ytrB [H]

Synonym: BCAH820_2907

Alternate gene names: 218904023

Gene position: 2750675-2749803 (Counterclockwise)

Preceding gene: 218904024

Following gene: 218904022

Centisome position: 51.87

GC content: 31.5

Gene sequence:

>873_bases
ATGATTGCACTTGAAACGAAAAAGATAACGAAAAAATATAAAAAGAAAGTAGCTGTAAATGAAGTTACGATTTCATTGGA
AGAGCATAAAATATATGGTTTGCTTGGGAGAAATGGAGCAGGAAAAACGACACTATTAAATTTACTTGCAGGTCAAATTA
CTTCAAGTAGTGGAAGCGTATCAATATTTGGCGAACATGTTTTTGAGAATAGTAAAGCGATGCAAAATATTTGTTTTGTT
AGAGTAAAAGAAGAAGCTCATTTAAGTTTTAAAGTAAAAGAAATTTTTAAGATGTGCAGCATGTTTTATAAAAACTGGGA
TGGAAAGTATGCTGAAGAACTCGCTAATAAATTTCAGCTTAATATGACAGTGAAATATCATAAATTATCACACGGCATGC
AAACAGTCGTCGGCATTATTCAAGGGTTAGCAAGTAGGGCGCCAATAACAATTTTTGATGAACCGACTACAGGTTTAGAC
GCAGCACATCGAGAGTTATTTTATAGTTTACTACTAGAAGATTACGCTGAGTATCCACGAACAATTATATTATCAACACA
TTTAGTAGAAGAAGTAACCCATGTGATTGAAGATGTAATTATCATAAAAGAAGGAAGATTAGTTATTCAATCATTGGTGG
AAGATTTATTACAACAAGTTCAGATTATTTCAGGGCAAAAGGATAAAGTGGACGAGTTCTTGATCAATAAAAAAGTATTA
AATCGAGAAGTTTATGGAAATAAGGGAATTGCTGTTATATGGGAAGAACTTTCTAATGAAGATTATTACTCTCTTGAAAA
AGAAGGTTTAGCAATTGATAGAATTACATTGCAAAAATTATTTATTCATATAACTGGTGGTGAAGTGAAATGA

Upstream 100 bases:

>100_bases
AATATTTACCGAAAGTGTGGGAAGAAGCAAAAGTGCTAGAAATATCAAAAGATGAATTGATGGATATGATTCAAAAAATT
ACGAAGGAGGGGAAAGAGGG

Downstream 100 bases:

>100_bases
CGATGTTAATGAAGCAGTTAAAGTTACATATTAATTTTCATTATAAAGCAATTTTAATATTTTGGATTGTCGCTTTATTA
ATAAAAGGGTCTTTAACTGC

Product: putative ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MIALETKKITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSVSIFGEHVFENSKAMQNICFV
RVKEEAHLSFKVKEIFKMCSMFYKNWDGKYAEELANKFQLNMTVKYHKLSHGMQTVVGIIQGLASRAPITIFDEPTTGLD
AAHRELFYSLLLEDYAEYPRTIILSTHLVEEVTHVIEDVIIIKEGRLVIQSLVEDLLQQVQIISGQKDKVDEFLINKKVL
NREVYGNKGIAVIWEELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK

Sequences:

>Translated_290_residues
MIALETKKITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSVSIFGEHVFENSKAMQNICFV
RVKEEAHLSFKVKEIFKMCSMFYKNWDGKYAEELANKFQLNMTVKYHKLSHGMQTVVGIIQGLASRAPITIFDEPTTGLD
AAHRELFYSLLLEDYAEYPRTIILSTHLVEEVTHVIEDVIIIKEGRLVIQSLVEDLLQQVQIISGQKDKVDEFLINKKVL
NREVYGNKGIAVIWEELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK
>Mature_290_residues
MIALETKKITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSVSIFGEHVFENSKAMQNICFV
RVKEEAHLSFKVKEIFKMCSMFYKNWDGKYAEELANKFQLNMTVKYHKLSHGMQTVVGIIQGLASRAPITIFDEPTTGLD
AAHRELFYSLLLEDYAEYPRTIILSTHLVEEVTHVIEDVIIIKEGRLVIQSLVEDLLQQVQIISGQKDKVDEFLINKKVL
NREVYGNKGIAVIWEELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK

Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=220, Percent_Identity=30, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI47078218, Length=220, Percent_Identity=30, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI105990541, Length=210, Percent_Identity=31.9047619047619, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI27881501, Length=207, Percent_Identity=28.0193236714976, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI30795238, Length=207, Percent_Identity=28.0193236714976, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI21536376, Length=225, Percent_Identity=27.5555555555556, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI116734710, Length=208, Percent_Identity=30.2884615384615, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI27262624, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI27262626, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI150417984, Length=203, Percent_Identity=30.0492610837438, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI27436953, Length=213, Percent_Identity=25.8215962441315, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI31657092, Length=208, Percent_Identity=27.8846153846154, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI27477115, Length=224, Percent_Identity=27.2321428571429, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI6005701, Length=211, Percent_Identity=25.1184834123223, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1786319, Length=292, Percent_Identity=26.7123287671233, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1786563, Length=212, Percent_Identity=27.3584905660377, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081782, Length=223, Percent_Identity=26.0089686098655, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI48994943, Length=224, Percent_Identity=22.3214285714286, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1788210, Length=237, Percent_Identity=27.8481012658228, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI48995001, Length=218, Percent_Identity=27.0642201834862, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1790190, Length=221, Percent_Identity=28.9592760180996, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87081709, Length=221, Percent_Identity=25.7918552036199, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=25.5506607929515, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=23.2456140350877, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788761, Length=230, Percent_Identity=24.7826086956522, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788225, Length=239, Percent_Identity=25.5230125523013, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1787029, Length=248, Percent_Identity=25.4032258064516, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789593, Length=232, Percent_Identity=22.8448275862069, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787712, Length=211, Percent_Identity=27.4881516587678, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1788472, Length=216, Percent_Identity=24.537037037037, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1786803, Length=225, Percent_Identity=23.1111111111111, Blast_Score=61, Evalue=8e-11,
Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=26.9406392694064, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=211, Percent_Identity=27.0142180094787, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71983523, Length=211, Percent_Identity=27.0142180094787, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71983510, Length=211, Percent_Identity=27.0142180094787, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17565586, Length=212, Percent_Identity=25.9433962264151, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=219, Percent_Identity=21.9178082191781, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221512771, Length=220, Percent_Identity=30, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24643674, Length=221, Percent_Identity=27.6018099547511, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24666092, Length=319, Percent_Identity=25.705329153605, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28573573, Length=210, Percent_Identity=29.0476190476191, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28573571, Length=210, Percent_Identity=29.0476190476191, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24582014, Length=245, Percent_Identity=28.1632653061224, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582012, Length=245, Percent_Identity=28.1632653061224, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574150, Length=213, Percent_Identity=24.4131455399061, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI116007328, Length=213, Percent_Identity=24.4131455399061, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32912; Mature: 32912

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALETKKITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSV
CCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE
SIFGEHVFENSKAMQNICFVRVKEEAHLSFKVKEIFKMCSMFYKNWDGKYAEELANKFQL
EEEHHHHHCCHHHHHHEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHEEE
NMTVKYHKLSHGMQTVVGIIQGLASRAPITIFDEPTTGLDAAHRELFYSLLLEDYAEYPR
EEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
TIILSTHLVEEVTHVIEDVIIIKEGRLVIQSLVEDLLQQVQIISGQKDKVDEFLINKKVL
EEEHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NREVYGNKGIAVIWEELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK
HHHHCCCCCCEEEEHHHCCCCCEEHHHCCCEEHHHHHHHEEEEEECCCCC
>Mature Secondary Structure
MIALETKKITKKYKKKVAVNEVTISLEEHKIYGLLGRNGAGKTTLLNLLAGQITSSSGSV
CCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE
SIFGEHVFENSKAMQNICFVRVKEEAHLSFKVKEIFKMCSMFYKNWDGKYAEELANKFQL
EEEHHHHHCCHHHHHHEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHEEE
NMTVKYHKLSHGMQTVVGIIQGLASRAPITIFDEPTTGLDAAHRELFYSLLLEDYAEYPR
EEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
TIILSTHLVEEVTHVIEDVIIIKEGRLVIQSLVEDLLQQVQIISGQKDKVDEFLINKKVL
EEEHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NREVYGNKGIAVIWEELSNEDYYSLEKEGLAIDRITLQKLFIHITGGEVK
HHHHCCCCCCEEEEHHHCCCCCEEHHHCCCEEHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]