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The map label for this gene is pepF [H]

Identifier: 218903990

GI number: 218903990

Start: 2723980

End: 2725563

Strand: Reverse

Name: pepF [H]

Synonym: BCAH820_2874

Alternate gene names: 218903990

Gene position: 2725563-2723980 (Counterclockwise)

Preceding gene: 218903991

Following gene: 218903989

Centisome position: 51.4

GC content: 31.25

Gene sequence:

>1584_bases
ATGCATGAAATTGCTAAATGGGATTTAGGTCGATTGTATTCGAATACAGATATTTTAGTTCCAATATTGGAGTTGAAAGA
ACAATTTTTTGTAACAAAAGATATAGGGATTCTTTCAAATCTTATACAATCTATTGAAAAAGCAGAATACTATTTGTACT
GCCGATCAGCTGAAGAAAGTGTTTCATCTGACATTACTAGATTGACTATGAAAGTAAAGGAACTAAAAAGTGAAGTGCAG
CAAGTCATACAGCAAAGTGAAGTGGAAATTACCGATAATACTAGGCTAATAAAAGATGAACTTCATGCGTGGGAAAATAT
GTACATACAATTAAGGGATAGGATAGAAATAGAACACAATAATAAGCAATTATCATTTGGACAAGCAAATCATGTTGCAA
TGAATAGTGATAATGAAAAGGAAAGAGTAAAAGTATTCGAGTCATTAACATGTGCTTTACATAAGGAGAAAGAAATTTTT
GCTACTGTATTAAATCAAATAGGAAGATTGCGTAATACAAAGGGCAATGAATTAGAAGATAGAGAGATTTTAGCAAGGTC
CCTTCATGCGAATGGTATTTCAGAAACTGTATTATTACAAATATGGAATGCGACAGAAGAAAACCTAGATAAATTAGTAA
GTGCTTTAAACGTGTATAAAAAAGGAAAAATCTCGATAACATGGCATGAAATTATGACAGTAAAGGAAAATAATGAGGCT
ATTATTCCTTTTTCAGTAGCAGTACAAAACATATACGGTGCATTTAAAAATATAGATGAAGAATTAGCAGAATTTGCACG
TAATGCGATAGAAAGTGGTTGGGTAGATGCAGAACCGCGAGAGAATAAACCCCCAGGTGGATTTTGTGCTCCTTTTTTCA
GTGAAAAAGAATCTCGAATCTCTATGCGTTATGACGGAAGTATCGATAGTGTAAGAATACTTGCCCACGAACTAGGACAT
GCTTGGCATTTTTATAATATGAGTTTTGAGCAATCCTCTTCTTTTTTAGATGATTATTTGCCAATGAGTACAGCTGAATC
AGCGTCTATTTTCTTTGAAACGTTGCTTATAAATTATCTAATTCAAACAACAGATAGTATAGATATAAAAAAGTCATTGC
TTAGCTGGAAAATAAGAAACTGTTTTAATTATGTAATGGCAATTCGAGCATCGTTCGAATTTGAGAAGAACTTTTATGAA
AAATGTAAAGAAAGTCCTATAAGTGCTGATGAAATCGAGAAAATATCTATAGTAGCGCAAGAAAAAGCATATGGGAATGC
ATTATCAGAATATCAGCCATTTGTTTGGATGAAATATGTCCAGTTTTATATAGCAGATGTTCCTTTTTATAATTATCCAT
ACACATTTGGATATTTAGTTAGTTTTAGTTTATTAGAAATAGCTAAAGAAAATAAAAGTACATTTCATTCGAAGTATAAA
GAATTTTTAAGAGAAACTGGAAAGGCTCCAGTGGAAGAGCTTATAAAAAAACATTTTGAAATAGATATAACAAGCTATGC
ATTCTGGCATAAAGCTTTTAAACAAATTTCTAAAGATATTGATGCATATTTGAGGCTTATATAA

Upstream 100 bases:

>100_bases
AATCTAAATACTTAAAGATATTAAAATTTTTTCGTTTCATATATAATTGTGAAGGGGGAATATTTGTAACTATTTGTAAA
AAAGGGAGGCGGCTATAGAA

Downstream 100 bases:

>100_bases
GGGGAGAGTATAGTGGATCACCAACTTATAAAGGGAATACCTTTTTCAACTTTAGAATATGCAAAAGCTATAAGTTTATT
AAAAGGTTGGCTACATGAAA

Product: peptidase, family M3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEESVSSDITRLTMKVKELKSEVQ
QVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHNNKQLSFGQANHVAMNSDNEKERVKVFESLTCALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKISITWHEIMTVKENNEA
IIPFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYE
KCKESPISADEIEKISIVAQEKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
EFLRETGKAPVEELIKKHFEIDITSYAFWHKAFKQISKDIDAYLRLI

Sequences:

>Translated_527_residues
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEESVSSDITRLTMKVKELKSEVQ
QVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHNNKQLSFGQANHVAMNSDNEKERVKVFESLTCALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKISITWHEIMTVKENNEA
IIPFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYE
KCKESPISADEIEKISIVAQEKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
EFLRETGKAPVEELIKKHFEIDITSYAFWHKAFKQISKDIDAYLRLI
>Mature_527_residues
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEESVSSDITRLTMKVKELKSEVQ
QVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHNNKQLSFGQANHVAMNSDNEKERVKVFESLTCALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKISITWHEIMTVKENNEA
IIPFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYE
KCKESPISADEIEKISIVAQEKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
EFLRETGKAPVEELIKKHFEIDITSYAFWHKAFKQISKDIDAYLRLI

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 61315; Mature: 61315

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEES
CCCCHHCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHH
VSSDITRLTMKVKELKSEVQQVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHEEEEEEEEEEEC
NKQLSFGQANHVAMNSDNEKERVKVFESLTCALHKEKEIFATVLNQIGRLRNTKGNELED
CCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKISITWHEIMTVKENNEA
HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEHHEEEEECCCCE
IIPFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEE
SMRYDGSIDSVRILAHELGHAWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYL
EEEECCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYEKCKESPISADEIEKISIVAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEH
EKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
HHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLRETGKAPVEELIKKHFEIDITSYAFWHKAFKQISKDIDAYLRLI
HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHEIAKWDLGRLYSNTDILVPILELKEQFFVTKDIGILSNLIQSIEKAEYYLYCRSAEES
CCCCHHCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHH
VSSDITRLTMKVKELKSEVQQVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHEEEEEEEEEEEC
NKQLSFGQANHVAMNSDNEKERVKVFESLTCALHKEKEIFATVLNQIGRLRNTKGNELED
CCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILARSLHANGISETVLLQIWNATEENLDKLVSALNVYKKGKISITWHEIMTVKENNEA
HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEHHEEEEECCCCE
IIPFSVAVQNIYGAFKNIDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCEE
SMRYDGSIDSVRILAHELGHAWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYL
EEEECCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IQTTDSIDIKKSLLSWKIRNCFNYVMAIRASFEFEKNFYEKCKESPISADEIEKISIVAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEH
EKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
HHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLRETGKAPVEELIKKHFEIDITSYAFWHKAFKQISKDIDAYLRLI
HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]