Click here to switch to the map view.

The map label for this gene is gbpA [H]

Identifier: 218903949

GI number: 218903949

Start: 2688492

End: 2689157

Strand: Reverse

Name: gbpA [H]

Synonym: BCAH820_2833

Alternate gene names: 218903949

Gene position: 2689157-2688492 (Counterclockwise)

Preceding gene: 218903950

Following gene: 218903948

Centisome position: 50.71

GC content: 36.94

Gene sequence:

>666_bases
ATGAAAACGAAAGGTTTACAGAAGGTGAAGAAAGTTATATTAAGTGGTGGGATATTACTTACAGGATTGTTAACTTTCGG
TTTTTCAGAAAAAGCTTCAGCTCATGGATACGTAGAATCACCAGCGAGCCGTTCTTATTTATGTAAGCAAGGGGTAAATG
TAAATTGTGGTCCGATTCAATATGAGCCGCAAAGTGTAGAAGGAATAGGTGGATTCCCACAATTAGGACCTTCTGATGGA
CAAATCGCAGGAGCTGGCCATTTCCCTGCTTTAGACGTTCAAACAGTTGATAGGTGGAAAAAAGTTACGTTAAACGGCGG
AACGAATACATTTAAGTGGAAACTAACTGCACCTCATAGTACGAAAGAATGGAAATATTATATTACGAAAAAAGATTGGA
ATCCAAATAAGCCACTATCACGATCTGATTTAGATTTAGTACCTTTCTATGTGAAAAATGATGGAGGAGCTAGACCTGGA
ACTTCAGTAACACATGAAGCAAATGTACCAACTGATAGAAATGGATATCACCTTATTTTAGCTGTGTGGGAAATAGCGGA
TACTGGAAATGCATTTTATCAAGTGATAGATGTTAACCTTGTAAATAACGGTTTAGCATCAAATAACGTGCTAAATCATG
TAGTGCAAGTTCCTACATTATTTTAA

Upstream 100 bases:

>100_bases
GGGTTCTTTTAGTAATGTTCCTCGACTTATAATGGATGTAGAGGAGATGACTAGGCAACTATAGTTATTTTCGCTTTATT
ATGGGAAAGGGGATGACGAG

Downstream 100 bases:

>100_bases
ATAAAGTATACATTTTGATCATCTAATTCATTTTAGATGATCTTTTTTATAAAAAACGATGAAAAATATAGAAGAAAGTG
CAATTATTTATAAAAAATTA

Product: putative chitin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKTKGLQKVKKVILSGGILLTGLLTFGFSEKASAHGYVESPASRSYLCKQGVNVNCGPIQYEPQSVEGIGGFPQLGPSDG
QIAGAGHFPALDVQTVDRWKKVTLNGGTNTFKWKLTAPHSTKEWKYYITKKDWNPNKPLSRSDLDLVPFYVKNDGGARPG
TSVTHEANVPTDRNGYHLILAVWEIADTGNAFYQVIDVNLVNNGLASNNVLNHVVQVPTLF

Sequences:

>Translated_221_residues
MKTKGLQKVKKVILSGGILLTGLLTFGFSEKASAHGYVESPASRSYLCKQGVNVNCGPIQYEPQSVEGIGGFPQLGPSDG
QIAGAGHFPALDVQTVDRWKKVTLNGGTNTFKWKLTAPHSTKEWKYYITKKDWNPNKPLSRSDLDLVPFYVKNDGGARPG
TSVTHEANVPTDRNGYHLILAVWEIADTGNAFYQVIDVNLVNNGLASNNVLNHVVQVPTLF
>Mature_221_residues
MKTKGLQKVKKVILSGGILLTGLLTFGFSEKASAHGYVESPASRSYLCKQGVNVNCGPIQYEPQSVEGIGGFPQLGPSDG
QIAGAGHFPALDVQTVDRWKKVTLNGGTNTFKWKLTAPHSTKEWKYYITKKDWNPNKPLSRSDLDLVPFYVKNDGGARPG
TSVTHEANVPTDRNGYHLILAVWEIADTGNAFYQVIDVNLVNNGLASNNVLNHVVQVPTLF

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 24097; Mature: 24097

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKGLQKVKKVILSGGILLTGLLTFGFSEKASAHGYVESPASRSYLCKQGVNVNCGPIQ
CCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEE
YEPQSVEGIGGFPQLGPSDGQIAGAGHFPALDVQTVDRWKKVTLNGGTNTFKWKLTAPHS
ECCCCCCCCCCCCCCCCCCCEEECCCCCCEECHHHHCCEEEEEECCCCCEEEEEEECCCC
TKEWKYYITKKDWNPNKPLSRSDLDLVPFYVKNDGGARPGTSVTHEANVPTDRNGYHLIL
CCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEE
AVWEIADTGNAFYQVIDVNLVNNGLASNNVLNHVVQVPTLF
EEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKTKGLQKVKKVILSGGILLTGLLTFGFSEKASAHGYVESPASRSYLCKQGVNVNCGPIQ
CCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEE
YEPQSVEGIGGFPQLGPSDGQIAGAGHFPALDVQTVDRWKKVTLNGGTNTFKWKLTAPHS
ECCCCCCCCCCCCCCCCCCCEEECCCCCCEECHHHHCCEEEEEECCCCCEEEEEEECCCC
TKEWKYYITKKDWNPNKPLSRSDLDLVPFYVKNDGGARPGTSVTHEANVPTDRNGYHLIL
CCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEE
AVWEIADTGNAFYQVIDVNLVNNGLASNNVLNHVVQVPTLF
EEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]