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The map label for this gene is gbpA [H]

Identifier: 218903916

GI number: 218903916

Start: 2660031

End: 2661398

Strand: Reverse

Name: gbpA [H]

Synonym: BCAH820_2800

Alternate gene names: 218903916

Gene position: 2661398-2660031 (Counterclockwise)

Preceding gene: 218903917

Following gene: 218903912

Centisome position: 50.19

GC content: 36.84

Gene sequence:

>1368_bases
ATGAATAATCGATTATTAAAACAACTACAAAACATGAAAATGAACAAAAAAAGTCTAGGAGCTGTTGCATTAACAGCTGG
AATTATTGGTACGACGCTTATTCCTCAAAACACATATGCGCATGGTTTTGTTGAAAAACCTGGCAGTCGATCTGCTTTAT
GTAGTCCAACTTATGGTGCACTAAATGTAAATTGCGGAAGTGTTATGTATGAACCGCAAAGCTTAGAAGCACCAAAAGGA
TTCCCGCAAGGTGGCCCAGTTGATGGACAAATCGCTTCTGCAGGCGGAAAATTTGGTGGTATTTTAGATCAACAAACAGC
CGATCGTTGGTTTAAAAATACAATTACAGGCGGGGAAAATACATTTACGTGGAAATATACAGCGCCTCACTTAACGAGCA
AATGGCATTACTATATTACAAAAAAAGGATGGGATCCAAATAAAGCGCTCACAAGAGCAGATTTAGAACCAATTGGAACT
GTACAACATGATGGCTCTGCAGCCTCAAATCATTTAACTCACAAAATTAATGTACCTACTGATAGAAGTGGATATCATGT
AATTTTAGCAGTATGGGATGTAGCTGATACTGCAAATGCATTCTATAATGTAATTGATGTTAATCTCATCAATGACGTAA
AACCAGACACAGAAGCTCCAAGCATTCCAAATAGAATTCAGGCACAAAAAGTAACAGCGAATAGTATAGAACTAGCATGG
AACGCTTCTACGGATAATGTAGGGGTAAAAGGGTATCAAATCTTCCGTAACGGAGAGATGATTGATACAGTAACAGGACC
TCATTTTATTGATAAAAAATTACAACCAAGTACAGAATACTCTTATACTGTAAAAGCAATTGACGCAGCTGGAAATGTAT
CGAAAGAAAGTGCAACGCTTACAGTGAAAACAACAGTTGAGGCTCCTGATACAGAAGCACCAACACAACCAAAAGGATTA
CATAGTATGGGAACGACAGCGTCAAGTGTGGATCTAATGTGGAGTCCTTCTGACGATAATATTGGTATAGACCATTACGA
TATTTATAGAGAAACAGAAGGATCGATGAAAAAGATTGCAACATCCAATACGACTTCTTATATGGATAAATATTTACTCT
CTAATACTACTTATAAATATGTAGTGAAAGCTATTGATGTAGCTGGAAATGAATCTATACAGAGTGATATATTCACAATT
ACTACAAAAACTGAAAGCGCTTCATATGGAGAGTGGGATGCAAAGAAAGCATATGAAAAGGGAGATAGAGTTCTACACGA
GGGAAAAGTATATGAAGCAGTCCAAAGTTATAAAGGAAATGGGGATCCAAACTGGATTTATGCCTTATCATTATGGAAAA
CAGTGTAA

Upstream 100 bases:

>100_bases
GCATAACACACACATACATCGTTACAAGATTGTCTCTTGTTATTCTTTTACATCGAAGCCCACATTACACTACAAATTAT
AACAAAAAGGGGACAGGAAC

Downstream 100 bases:

>100_bases
GCTTTACCTTGGTATGAACTAAGAGATAATGGGCTTTGATGCAAAAGGACATCTTGAGAATTCATTTTTCTACAAATAAA
AAAGGGCAGTATATGAATAC

Product: putative chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGALNVNCGSVMYEPQSLEAPKG
FPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGENTFTWKYTAPHLTSKWHYYITKKGWDPNKALTRADLEPIGT
VQHDGSAASNHLTHKINVPTDRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDTEAPSIPNRIQAQKVTANSIELAW
NASTDNVGVKGYQIFRNGEMIDTVTGPHFIDKKLQPSTEYSYTVKAIDAAGNVSKESATLTVKTTVEAPDTEAPTQPKGL
HSMGTTASSVDLMWSPSDDNIGIDHYDIYRETEGSMKKIATSNTTSYMDKYLLSNTTYKYVVKAIDVAGNESIQSDIFTI
TTKTESASYGEWDAKKAYEKGDRVLHEGKVYEAVQSYKGNGDPNWIYALSLWKTV

Sequences:

>Translated_455_residues
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGALNVNCGSVMYEPQSLEAPKG
FPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGENTFTWKYTAPHLTSKWHYYITKKGWDPNKALTRADLEPIGT
VQHDGSAASNHLTHKINVPTDRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDTEAPSIPNRIQAQKVTANSIELAW
NASTDNVGVKGYQIFRNGEMIDTVTGPHFIDKKLQPSTEYSYTVKAIDAAGNVSKESATLTVKTTVEAPDTEAPTQPKGL
HSMGTTASSVDLMWSPSDDNIGIDHYDIYRETEGSMKKIATSNTTSYMDKYLLSNTTYKYVVKAIDVAGNESIQSDIFTI
TTKTESASYGEWDAKKAYEKGDRVLHEGKVYEAVQSYKGNGDPNWIYALSLWKTV
>Mature_455_residues
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGALNVNCGSVMYEPQSLEAPKG
FPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGENTFTWKYTAPHLTSKWHYYITKKGWDPNKALTRADLEPIGT
VQHDGSAASNHLTHKINVPTDRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDTEAPSIPNRIQAQKVTANSIELAW
NASTDNVGVKGYQIFRNGEMIDTVTGPHFIDKKLQPSTEYSYTVKAIDAAGNVSKESATLTVKTTVEAPDTEAPTQPKGL
HSMGTTASSVDLMWSPSDDNIGIDHYDIYRETEGSMKKIATSNTTSYMDKYLLSNTTYKYVVKAIDVAGNESIQSDIFTI
TTKTESASYGEWDAKKAYEKGDRVLHEGKVYEAVQSYKGNGDPNWIYALSLWKTV

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 49805; Mature: 49805

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGA
CCHHHHHHHHHCCCCHHHCCHHEEHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCE
LNVNCGSVMYEPQSLEAPKGFPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGEN
EEECCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
TFTWKYTAPHLTSKWHYYITKKGWDPNKALTRADLEPIGTVQHDGSAASNHLTHKINVPT
EEEEEEECCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCEECCCCCCCCCCEEEEECCC
DRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDTEAPSIPNRIQAQKVTANSIELAW
CCCCCEEEEEEEECHHHHHHHEEEEEEEEECCCCCCCCCCCCCCHHEEEEEECCEEEEEE
NASTDNVGVKGYQIFRNGEMIDTVTGPHFIDKKLQPSTEYSYTVKAIDAAGNVSKESATL
ECCCCCCCCCEEEEEECCCEEEECCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEE
TVKTTVEAPDTEAPTQPKGLHSMGTTASSVDLMWSPSDDNIGIDHYDIYRETEGSMKKIA
EEEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCHHEEEECCCCCHHHHH
TSNTTSYMDKYLLSNTTYKYVVKAIDVAGNESIQSDIFTITTKTESASYGEWDAKKAYEK
CCCHHHHHHHHHHCCCHHHEEEEEHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
GDRVLHEGKVYEAVQSYKGNGDPNWIYALSLWKTV
HHHEECCCHHHHHHHHHCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNNRLLKQLQNMKMNKKSLGAVALTAGIIGTTLIPQNTYAHGFVEKPGSRSALCSPTYGA
CCHHHHHHHHHCCCCHHHCCHHEEHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCE
LNVNCGSVMYEPQSLEAPKGFPQGGPVDGQIASAGGKFGGILDQQTADRWFKNTITGGEN
EEECCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
TFTWKYTAPHLTSKWHYYITKKGWDPNKALTRADLEPIGTVQHDGSAASNHLTHKINVPT
EEEEEEECCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCEECCCCCCCCCCEEEEECCC
DRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDTEAPSIPNRIQAQKVTANSIELAW
CCCCCEEEEEEEECHHHHHHHEEEEEEEEECCCCCCCCCCCCCCHHEEEEEECCEEEEEE
NASTDNVGVKGYQIFRNGEMIDTVTGPHFIDKKLQPSTEYSYTVKAIDAAGNVSKESATL
ECCCCCCCCCEEEEEECCCEEEECCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEE
TVKTTVEAPDTEAPTQPKGLHSMGTTASSVDLMWSPSDDNIGIDHYDIYRETEGSMKKIA
EEEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCHHEEEECCCCCHHHHH
TSNTTSYMDKYLLSNTTYKYVVKAIDVAGNESIQSDIFTITTKTESASYGEWDAKKAYEK
CCCHHHHHHHHHHCCCHHHEEEEEHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
GDRVLHEGKVYEAVQSYKGNGDPNWIYALSLWKTV
HHHEECCCHHHHHHHHHCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]