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The map label for this gene is ypeB [H]

Identifier: 218903871

GI number: 218903871

Start: 2627014

End: 2628354

Strand: Reverse

Name: ypeB [H]

Synonym: BCAH820_2755

Alternate gene names: 218903871

Gene position: 2628354-2627014 (Counterclockwise)

Preceding gene: 218903872

Following gene: 218903870

Centisome position: 49.57

GC content: 35.05

Gene sequence:

>1341_bases
ATGTTACGAGGTATTATAATCGTATTATTAACAATCGGTGTAGTCGGCACAGGGTACTGGGGCTATAAAGAGCATCAAGA
GAAGAATGCAGTATTAATTCGGGCAGAAAATAGCTATCAACGTGCGTTTCACGATTTAGCGTACGAGGTAGATTTATTAC
ACGATAAAATTGGTACAACGCTTGCGATGAATTCACGTGCATCTTTATCACCTGCATTAGCAGATGTATGGAGATTAACA
TCTGAAGCTCGTTCAGATGTAGGGCAACTTCCTTTAACATTAATGCCTTTTAATAAAACGGAAGAATTTTTAGCGAATAT
CGGTGATTTTAGTTACCGTGCAGCTATTCGTGATCTAGAAAAAGAGCCGTTAAATGCTCAAGAATACAAAACGTTGCAAA
CTTTATACTCAAATGCCGGAAATATACAAGATGAACTAAGAAAAGTGCAACATCTTGTTTTGAAAAACAATTTACGCTGG
ATGGATGTTGAGATGGCACTCGCATCCAATCGTGATCCTGCCGACAATACAATTATTGACGGACTAAAGACAGTAGAAAA
AAATGTAACATCGTATTCATCTACAAACTTCGGACCTACCTTTACAAGTGCACAAAAAAATAAAAAAGGTGGATTTGAAG
CAGAAGGAAAAGCAATTTCAAAAGATGAAGCTGCGAAAATCGCAAAATCGTTCTTGAATTTAAAAGGAAATGAAAAAGTA
GAAGTTGAGAAAAGTGGAAAAGGTGCGAAAGAATCTTTCTATAGTGTGAAAATTAAAGATGAAGCAACGAATAATGAGTT
TTATATGGATATTACCGGAAAAGGCGGATATCCAATTTGGGTTATGAATAATCGAGAAATTAAAGAACAGAAGATTAGTT
TAAATGACGCAGGAAGTAAAGGTTTGAAATTCTTAAAGGACCATAAGTTTAATAATATGGAGCTTTATGATAGCTCACAA
TATGATAATGTTGGAGTATTTACGTATGTAGTAAATGAGAATGGCGTACGAATTTATCCTGAAGCAATTCAAATGAAAAT
TGCTTTAGATGACGGTTCTATCGTTGGATTCTCCGCAAAAGAATATTTAGCGTCACATCAAAAACGAACAGTTCCATCAG
CAAAACTAACTGCAGCAGAAGCAAGAAAGAAAATTAATCCAGATGTGAAAGTTATGGAAGAACGTAAAGCTGTCGTAGTA
AATGATCTGCATAATGAAGTACTTTGCTATGAATTTGTAGGTACGTTAGGGAAAGATACGTACCAAATCTTCATTAATGC
AAATAGCGGAGCAGAAGAAAAAGTGAAGAAAATGCAGGCTGTTGAAAAAATTTATGATTAA

Upstream 100 bases:

>100_bases
CTTCAATCCAGATACTGCAACAAGTAAATGGATTTGGACTCGTCCACAAATTAAAAAGATCGGGAAACATATTTTCTGTA
AATAGAGCGGAGGTGGAACT

Downstream 100 bases:

>100_bases
ACTTTAATGGTAAAGTGGTGAGAATAATGAAAATCTTAATATATATATTGATGGTTTGTTTTTTTATAACTGGATGTAGT
ATTGGAAAAAAGGATAGTCC

Product: germination protein YpeB

Products: NA

Alternate protein names: PSPA12 [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTTLAMNSRASLSPALADVWRLT
SEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLEKEPLNAQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRW
MDVEMALASNRDPADNTIIDGLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSKGLKFLKDHKFNNMELYDSSQ
YDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAKEYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVV
NDLHNEVLCYEFVGTLGKDTYQIFINANSGAEEKVKKMQAVEKIYD

Sequences:

>Translated_446_residues
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTTLAMNSRASLSPALADVWRLT
SEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLEKEPLNAQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRW
MDVEMALASNRDPADNTIIDGLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSKGLKFLKDHKFNNMELYDSSQ
YDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAKEYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVV
NDLHNEVLCYEFVGTLGKDTYQIFINANSGAEEKVKKMQAVEKIYD
>Mature_446_residues
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTTLAMNSRASLSPALADVWRLT
SEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLEKEPLNAQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRW
MDVEMALASNRDPADNTIIDGLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSKGLKFLKDHKFNNMELYDSSQ
YDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAKEYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVV
NDLHNEVLCYEFVGTLGKDTYQIFINANSGAEEKVKKMQAVEKIYD

Specific function: Required for spore cortex hydrolysis during germination. Appears to be required for either expression, localization, activation or function of sleB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ypeB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014239 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50037; Mature: 50037

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTT
CCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCE
LAMNSRASLSPALADVWRLTSEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLE
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHH
KEPLNAQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRWMDVEMALASNRDPADNTIID
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHH
GLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSK
EEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCH
GLKFLKDHKFNNMELYDSSQYDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAK
HHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCEEECCHH
EYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVVNDLHNEVLCYEFVGTLGKDT
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCEEEEEHHCCHHHHHHHHHHCCCCE
YQIFINANSGAEEKVKKMQAVEKIYD
EEEEEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTT
CCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCE
LAMNSRASLSPALADVWRLTSEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLE
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHH
KEPLNAQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRWMDVEMALASNRDPADNTIID
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHH
GLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAAKIAKSFLNLKGNEKV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSK
EEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCH
GLKFLKDHKFNNMELYDSSQYDNVGVFTYVVNENGVRIYPEAIQMKIALDDGSIVGFSAK
HHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCEEECCHH
EYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVVNDLHNEVLCYEFVGTLGKDT
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCEEEEEHHCCHHHHHHHHHHCCCCE
YQIFINANSGAEEKVKKMQAVEKIYD
EEEEEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 8830707; 3145906; 10658652; 12177332 [H]