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The map label for this gene is rutD [H]

Identifier: 218903818

GI number: 218903818

Start: 2570172

End: 2571005

Strand: Direct

Name: rutD [H]

Synonym: BCAH820_2702

Alternate gene names: 218903818

Gene position: 2570172-2571005 (Clockwise)

Preceding gene: 218903817

Following gene: 218903820

Centisome position: 48.47

GC content: 32.73

Gene sequence:

>834_bases
ATGTGGACAACAAATATTATCAAAACTCCAAGAGGAAAGTTTGAATATTTTCTAAAGGGAGAAGGACCTCCACTTTGCGT
TACTCATTTGTATAGTGAGTATAATGATAATGGAAATACTTTTGCAAACCCATTTACTGACCATTATAGCGTATATTTAG
TTAACTTAAAGGGATGTGGCAATTCAGATTCAGCAAAAAATGACTCTGAATATAGTATGACCGAAACGATTAAAGATTTA
GAAGCGATTCGAGAAGCTTTATATATTAATAAATGGGGGTTTGCAGGTCATTCGACAGGAGGGATGTTAGCTCTTGTATA
TGCGACTGAAGCACAAGAAAGTTTAACGAAAATAATTGTTGGTGGCGCAGCGGCGAGTAAGGAATATGCATCTCATAAAG
ATAGTATATACTGTAGTGAAAATGAAAATTTTAATAAAATCCTATCAATTATGAATGCATTAAATGATGATAGTACATTA
CAAGAAGAAAGAAAAGCATTAAGTAGAGAGTGGGCACTTATGTCTTTTTATTCTGAAGAAAAGCTTGAAGAAGCGTTAAA
ACTGCCGAATAGCGGAAAGACAGTTGGCAATCGGCTAAATTATTTTAGACAAGTTGAATATAAAGATTATGATGTTCGTC
AGAAACTTAAATTCGTAAAAATCCCAAGTTTTATATACTGTGGTAAGCATGATGCACAATGTCCCTACATATTTTCTCGT
GAAATAGCAAATTTAATCCCGAACGCAACATTAACTAAATTTGAAGAAAGTAATCATAATCCATTCGTTGAAGAAATAGA
CAAGTTTAATCAGTTTGTCAACGATACATTATAA

Upstream 100 bases:

>100_bases
TGGCGGAAAAGCTAATATAGTAAAGTAATAATTTTATTTATGAATTTACTTCTAAAAAGCAGATAGAAATAAAATTCTAG
TTTTAGACAGGAGATTCGAT

Downstream 100 bases:

>100_bases
TCAATAAGTAAAAAGCGAATCTTTTATATAAGACAGATTCGCTTTTTATTATAATTAGACTTTTTGCCACCAAGCATACC
TAGGATAGTCTGTAGATTTT

Product: hydrolase, alpha/beta fold family

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MWTTNIIKTPRGKFEYFLKGEGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDL
EAIREALYINKWGFAGHSTGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSENENFNKILSIMNALNDDSTL
QEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDAQCPYIFSR
EIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL

Sequences:

>Translated_277_residues
MWTTNIIKTPRGKFEYFLKGEGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDL
EAIREALYINKWGFAGHSTGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSENENFNKILSIMNALNDDSTL
QEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDAQCPYIFSR
EIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL
>Mature_277_residues
MWTTNIIKTPRGKFEYFLKGEGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDL
EAIREALYINKWGFAGHSTGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSENENFNKILSIMNALNDDSTL
QEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDAQCPYIFSR
EIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 31607; Mature: 31607

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTTNIIKTPRGKFEYFLKGEGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCG
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCCCEEEEEEEEECCC
NSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSTGGMLALVYATEAQESLTKIIV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHH
GGAAASKEYASHKDSIYCSENENFNKILSIMNALNDDSTLQEERKALSREWALMSFYSEE
CCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDAQCPYIFSR
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHH
EIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL
HHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWTTNIIKTPRGKFEYFLKGEGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCG
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCCCEEEEEEEEECCC
NSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSTGGMLALVYATEAQESLTKIIV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHH
GGAAASKEYASHKDSIYCSENENFNKILSIMNALNDDSTLQEERKALSREWALMSFYSEE
CCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDAQCPYIFSR
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHH
EIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL
HHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA