Click here to switch to the map view.

The map label for this gene is yfiS [H]

Identifier: 218903705

GI number: 218903705

Start: 2462159

End: 2463385

Strand: Reverse

Name: yfiS [H]

Synonym: BCAH820_2589

Alternate gene names: 218903705

Gene position: 2463385-2462159 (Counterclockwise)

Preceding gene: 218903710

Following gene: 218903690

Centisome position: 46.46

GC content: 35.04

Gene sequence:

>1227_bases
GTGAAACTTATACAAGAACGTAGCCTTACCGTAAAGACAACTTTTTCTAAAGAATACAAGATTTTTATTTTTGGTTTACT
CATTTCACGAATTGGAGACTCATTCTATACTTTTGCGTTACCTTGGATTGCCTATCAATTAACCGGTTCAGCTGTAATTA
TGAGTTCTTTATTTGCTATTAACGTATTACCAATCGTTTTATTTTGCCCTTTAGTTGGTGTAATAATTGATCGTTATGAT
CGAAAAAAGTTACTTTTGGTAGCGGATATTACCAATATTATTTTAGTAAGTTTTGTACCAATACTACATTCATTACACCT
ATTAGAAATCTGGCATTTATACATAATTACTTTTATGTTAGCAGTTATGTCCATGCTTTTTGATGTAACAACCGTTACAG
TCATTCCGCAGATTGCTGCAGCATCCTTAACGAAAGCCAATTCTTTCTATCAAATGGTCAATCAATTAGCCAGTTTATTT
GGTCCAATGATAGCTGGGGTTTTCATTTCTTTTATTGGCGGCTTTCAGTTGCTTTGGATTAATGTTCTTTCATTTATTGC
TACATTAGTTGCTGTGATGTTATTACCGTCTATGAAAACCACAAATAAAAAATGCGAAGATAAAAATACACTTCAAAATG
TACTATCTGATTTGGTTAATGGATTTACATGGCTCAAAAATGACCGCTTAAATTTAGCTTTATCTTTTCAAGCTATGATA
GGAAACTTTGGAGCAAGTGCGGTTTTAGGTGTATTCATGTATTATTTATTATCCACATTACAACTTACCCCAGAACAAAG
TGGGGTGAATTATTCATTAATTGGAATAGGTGGTCTTTTAGGAAGCTTGATTGCAATTCCTTTAGAAAAAAGGTTGCAGC
GCGGCATACTAATCCCTTTACTCCTATTTGTTGGAGCAATTGGCTTAACTTTCGCGCTTTGGAATACATATTGGTTCGCT
CCTGGAATTGCTTTCGGTGTTGCAATGACTTGCAATATTGCATGGAATACAATTGTAGCCACAGTTCGCCAGGAAACAGT
CCCATCAAATATGCAAGGGAGAGTTTTAGGATTTTCACGTGTACTTACACGATTAGCTATGCCACTCGGGGCATTAGTAG
GAGGCATTATTTCAGCTTATAATCCAGTGTATGTATTTGCTTTAGCTGCCTTTACGAAGTTACTTGAAGTTTTTATTGCA
CTATGTAGTCCGATACGAAAGCTATGA

Upstream 100 bases:

>100_bases
TAAAAAGTAGGATTCACCAAAAAATTACAGAATTATATATACAACAAGTATTGGACGGCTTTTTTTCAAATTCCTCTATA
ATAAAGGTGGTATAAACAGT

Downstream 100 bases:

>100_bases
TGGAAGGAAAGATAATTATGTATGATTGGTTAATTAAAATTTATGGATAAGTTTATAAAGAAAAAAGGCATATTATAATG
CCTTTTTTCTTTATCATCAT

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MKLIQERSLTVKTTFSKEYKIFIFGLLISRIGDSFYTFALPWIAYQLTGSAVIMSSLFAINVLPIVLFCPLVGVIIDRYD
RKKLLLVADITNIILVSFVPILHSLHLLEIWHLYIITFMLAVMSMLFDVTTVTVIPQIAAASLTKANSFYQMVNQLASLF
GPMIAGVFISFIGGFQLLWINVLSFIATLVAVMLLPSMKTTNKKCEDKNTLQNVLSDLVNGFTWLKNDRLNLALSFQAMI
GNFGASAVLGVFMYYLLSTLQLTPEQSGVNYSLIGIGGLLGSLIAIPLEKRLQRGILIPLLLFVGAIGLTFALWNTYWFA
PGIAFGVAMTCNIAWNTIVATVRQETVPSNMQGRVLGFSRVLTRLAMPLGALVGGIISAYNPVYVFALAAFTKLLEVFIA
LCSPIRKL

Sequences:

>Translated_408_residues
MKLIQERSLTVKTTFSKEYKIFIFGLLISRIGDSFYTFALPWIAYQLTGSAVIMSSLFAINVLPIVLFCPLVGVIIDRYD
RKKLLLVADITNIILVSFVPILHSLHLLEIWHLYIITFMLAVMSMLFDVTTVTVIPQIAAASLTKANSFYQMVNQLASLF
GPMIAGVFISFIGGFQLLWINVLSFIATLVAVMLLPSMKTTNKKCEDKNTLQNVLSDLVNGFTWLKNDRLNLALSFQAMI
GNFGASAVLGVFMYYLLSTLQLTPEQSGVNYSLIGIGGLLGSLIAIPLEKRLQRGILIPLLLFVGAIGLTFALWNTYWFA
PGIAFGVAMTCNIAWNTIVATVRQETVPSNMQGRVLGFSRVLTRLAMPLGALVGGIISAYNPVYVFALAAFTKLLEVFIA
LCSPIRKL
>Mature_408_residues
MKLIQERSLTVKTTFSKEYKIFIFGLLISRIGDSFYTFALPWIAYQLTGSAVIMSSLFAINVLPIVLFCPLVGVIIDRYD
RKKLLLVADITNIILVSFVPILHSLHLLEIWHLYIITFMLAVMSMLFDVTTVTVIPQIAAASLTKANSFYQMVNQLASLF
GPMIAGVFISFIGGFQLLWINVLSFIATLVAVMLLPSMKTTNKKCEDKNTLQNVLSDLVNGFTWLKNDRLNLALSFQAMI
GNFGASAVLGVFMYYLLSTLQLTPEQSGVNYSLIGIGGLLGSLIAIPLEKRLQRGILIPLLLFVGAIGLTFALWNTYWFA
PGIAFGVAMTCNIAWNTIVATVRQETVPSNMQGRVLGFSRVLTRLAMPLGALVGGIISAYNPVYVFALAAFTKLLEVFIA
LCSPIRKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44994; Mature: 44994

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]