Click here to switch to the map view.

The map label for this gene is ybhR [H]

Identifier: 218903672

GI number: 218903672

Start: 2431776

End: 2432795

Strand: Direct

Name: ybhR [H]

Synonym: BCAH820_2556

Alternate gene names: 218903672

Gene position: 2431776-2432795 (Clockwise)

Preceding gene: 218903671

Following gene: 218903673

Centisome position: 45.86

GC content: 34.02

Gene sequence:

>1020_bases
ATGAGAGTAACCGGTGTAATCATTCGTATTATTCGCCAATTTTTTCGAGATAAACGTTCGTTAGCGATGATGTTTGGGGC
ACCTATGTTATTACTTTGGTTATTGTCACTAGTGTTTACACAAAAGGACTATGTACCGCATATTGCTGTTGTTGATATGC
CCGCTCAGTTAGTAAAAGTGATGAAAAATCAGGAAGCGTCAATTTATGAATATAATATAGAAAAGGCAATGTCTGAGCTG
GAAAATCAAAAGGTAGATGCAGTCATTCGTTTAGAAAATGGAAAAATGAATATTGTATTAGAAGGTAGCGATTCGTCAAA
AAATCGTGCTGTACTTCAAATATTACAAAAAAGTACAGAAAAGAACGATGTATCGATTATGAAACCTGAAGTAAATTATT
TACATGGCTCTAAAGACTTTACAATGTTTGATGGTCTGGGTCCCGTATTAATCGGTTTCTTTACATTTTTCTTTGTATTC
ATTTTATCAGGGGTGTCTTTCGTAAGAGAACGTTTAAGTGGTACGTTAGAAAGGTTATTATCCACTCCAGTAAGAAGATG
GGAAATAGTTGCAGGGTATATTATTGGTTTTGGAATCTTTGCCTTTATACAATCCATTATTATCGTAAGTTTTTCCGTTT
ATAGTTTAGACTTATACGTTGCCGGCTCCATCTGGCTAACGTTACTTATTGCATGTATGCTTTCTTTAACGGCATTAACT
TTAGGGACGTTTTTATCGGCATACGCAAATAATGAATTTCAAATGATCCAGTTTATACCGCTTGTCATTGTGCCACAAAT
TTTCTTTTCTGGTTTGTTTCCAATTGAATCTATGAATAAGTGGCTTCAAATGTTAGGGAAATTATTTCCACTCACATATG
GCGCTGACGCAATGAGACAGGTGATGATTCGAAATCAAGGATTTACAGAGATTGCATTAGATCTTACCGTATTATTACTT
TTTTCAATATTATTTGCAATAGGGAATGTATTTGCATTAAAGAAACATCGAAAAATATAA

Upstream 100 bases:

>100_bases
AAGGAAAGCTAGTTGCGACTGGTACAACTGAAGAATTGAAAAAGCGGGTATCATCAGGAAGGGTTGAAGATGTCTTTTTG
TTGGAAGAGGTGGCTGAATC

Downstream 100 bases:

>100_bases
TGATGATACAAAGGGGCATTATAGATGAAGAAAGATTGGCTGGAAGAATTAATTGCCGCAACTAACACGGATAAACGAAA
TGAACGTCAAATGCGTATAT

Product: putative ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKVMKNQEASIYEYNIEKAMSEL
ENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDVSIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVF
ILSGVSFVRERLSGTLERLLSTPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYSLDLYVAGSIWLTLLIACMLSLTALT
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQVMIRNQGFTEIALDLTVLLL
FSILFAIGNVFALKKHRKI

Sequences:

>Translated_339_residues
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKVMKNQEASIYEYNIEKAMSEL
ENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDVSIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVF
ILSGVSFVRERLSGTLERLLSTPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYSLDLYVAGSIWLTLLIACMLSLTALT
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQVMIRNQGFTEIALDLTVLLL
FSILFAIGNVFALKKHRKI
>Mature_339_residues
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKVMKNQEASIYEYNIEKAMSEL
ENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDVSIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVF
ILSGVSFVRERLSGTLERLLSTPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYSLDLYVAGSIWLTLLIACMLSLTALT
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQVMIRNQGFTEIALDLTVLLL
FSILFAIGNVFALKKHRKI

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=235, Percent_Identity=24.2553191489362, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 38496; Mature: 38496

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
MKNQEASIYEYNIEKAMSELENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTE
HHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCC
KNDVSIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVFILSGVSFVRERLSGTLERLL
CCCCEEECCCHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYSLDLYVAGSIWLTLLIACMLSLTALT
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
VMIRNQGFTEIALDLTVLLLFSILFAIGNVFALKKHRKI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
MKNQEASIYEYNIEKAMSELENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTE
HHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCC
KNDVSIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVFILSGVSFVRERLSGTLERLL
CCCCEEECCCHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYSLDLYVAGSIWLTLLIACMLSLTALT
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
VMIRNQGFTEIALDLTVLLLFSILFAIGNVFALKKHRKI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]