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The map label for this gene is ydbP [H]

Identifier: 218903452

GI number: 218903452

Start: 2218620

End: 2218934

Strand: Reverse

Name: ydbP [H]

Synonym: BCAH820_2336

Alternate gene names: 218903452

Gene position: 2218934-2218620 (Counterclockwise)

Preceding gene: 218903453

Following gene: 218903451

Centisome position: 41.85

GC content: 38.1

Gene sequence:

>315_bases
ATGAGAGAAATCAAGTCTGACAAGGAATTCAAAGACATCATCGCAAGCGAGGAGCCAGTAGTTGTTAAGTTCTTTACTAC
ATGGTGCCCAGATTGCGTGCGTATGGACAACTTTATCGGAGATGTGATGGAAGAGTTCAATAAGTTTGAATGGTATTCTA
TTAATAAAGATGAGTTCCCAAGTATCGCTGAAGAGTATCAAGTAATGGGTATTCCAAGTTTACTTGTATATCAAAATGGC
GAGAAGCTAGGCCACTTACATAGTGCTAATGCAAAAACTGAAGAGCAAGTTACTGAGTTTTTAGAAGCATACTAA

Upstream 100 bases:

>100_bases
AATCTATTTCAAAAACACTAATGTTTGCAAAATGTTTGCAATTACGGATTTTGCATAAAAATACTAGCTTATCCGTGTGA
CATTGAGAGGAGCCAAAAAC

Downstream 100 bases:

>100_bases
GATGAAAACCCTCTGAAAAATATTTTCTAGAGGGTTTTTATTTTTTCCAAATCAGCTGTCAGAAGTATACATATTTGTAC
TCCCTTCTCCTTCCCCGGTT

Product: thioredoxin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MREIKSDKEFKDIIASEEPVVVKFFTTWCPDCVRMDNFIGDVMEEFNKFEWYSINKDEFPSIAEEYQVMGIPSLLVYQNG
EKLGHLHSANAKTEEQVTEFLEAY

Sequences:

>Translated_104_residues
MREIKSDKEFKDIIASEEPVVVKFFTTWCPDCVRMDNFIGDVMEEFNKFEWYSINKDEFPSIAEEYQVMGIPSLLVYQNG
EKLGHLHSANAKTEEQVTEFLEAY
>Mature_104_residues
MREIKSDKEFKDIIASEEPVVVKFFTTWCPDCVRMDNFIGDVMEEFNKFEWYSINKDEFPSIAEEYQVMGIPSLLVYQNG
EKLGHLHSANAKTEEQVTEFLEAY

Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323072, Length=96, Percent_Identity=29.1666666666667, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 12196; Mature: 12196

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREIKSDKEFKDIIASEEPVVVKFFTTWCPDCVRMDNFIGDVMEEFNKFEWYSINKDEFP
CCCCCCCHHHHHHHCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC
SIAEEYQVMGIPSLLVYQNGEKLGHLHSANAKTEEQVTEFLEAY
CHHHHHHHCCCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MREIKSDKEFKDIIASEEPVVVKFFTTWCPDCVRMDNFIGDVMEEFNKFEWYSINKDEFP
CCCCCCCHHHHHHHCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC
SIAEEYQVMGIPSLLVYQNGEKLGHLHSANAKTEEQVTEFLEAY
CHHHHHHHCCCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]