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The map label for this gene is ykrA [H]

Identifier: 218903224

GI number: 218903224

Start: 2002198

End: 2002974

Strand: Direct

Name: ykrA [H]

Synonym: BCAH820_2108

Alternate gene names: 218903224

Gene position: 2002198-2002974 (Clockwise)

Preceding gene: 218903223

Following gene: 218903226

Centisome position: 37.76

GC content: 36.29

Gene sequence:

>777_bases
ATGTACAAAGTTGTATTTTTCGATGTTGACGGTACACTTTTAAGTGAGATTGATAGAAGTATGCACGAAAGTACAAAAGA
AGCGATACGTAGGTTAATAGATAAAGGGATTCATGTAGTTGTTACGACAGGGAGACCGTATAGTTTATGCTCACAATTTA
ATGCGCTGGGCATAAATACAATTATTTCTGCAAATGGTGCACATATCAAGTGTGGGGAAACAGTTATACATAAATCAGTA
CTTTCAAGTGAAATTGTTCATGATCTCTCAGAGTTTGCTGCATTACATGGTCACGGTGTTTCTTATTTTACAGAGGATTT
TGCAATGAACGGAATAGCCGCGGATAATGGACGTGTAATGCAAGCGCTTAGCGAGACGTTGAATTTAGAGAAGTATCCAG
AAAAAAGCAGGGATTTGTCAGAAGAAATCTATTGTTTATGTCTGTATGCAGATGAAATAGAAGCTCAAAAATTTCTTGAA
AGATATCCAGCACTTACGTTTGAACGTTTTCACGGTTACGTTATGAATGTGTTGGAAGATAATAAAATATCGAAGGTAAC
TGCAATTCAAAAGGTATTAGAACACCTAAACATTTGCAAATCAGAAGCCATTGCTTTTGGTGACGGTAGAAATGATATTG
AGATGTTAGAGTATGTAGGATTAGGTATTGCGATGGGGAATGGCGGAGAAGAGTTAAAAACAAGAGCTGATTTTGTTACA
AAGAAGGCGAGTGAAGGTGGTATTTTATTTGCCTTAGAAAAGTTTCATATCGTCTAA

Upstream 100 bases:

>100_bases
AATGGGAGATACGGGAATAAGCTTAATTGAAATTGACGGTGAACAAAAAACGGTACATTTCATTAATGATACGAATCATT
TGCACGGGATGTAGAGAATT

Downstream 100 bases:

>100_bases
CATACCTTTATTGAAATAAAGGTATGTTAGGATCTTTAATGTGCTCGCATAATAAAATATGTATTTGTCCACGATGATGA
TAAAAGTGTGCAACAATTTC

Product: HAD-superfamily hydrolase, subfamily IIB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MYKVVFFDVDGTLLSEIDRSMHESTKEAIRRLIDKGIHVVVTTGRPYSLCSQFNALGINTIISANGAHIKCGETVIHKSV
LSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAADNGRVMQALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLE
RYPALTFERFHGYVMNVLEDNKISKVTAIQKVLEHLNICKSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
KKASEGGILFALEKFHIV

Sequences:

>Translated_258_residues
MYKVVFFDVDGTLLSEIDRSMHESTKEAIRRLIDKGIHVVVTTGRPYSLCSQFNALGINTIISANGAHIKCGETVIHKSV
LSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAADNGRVMQALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLE
RYPALTFERFHGYVMNVLEDNKISKVTAIQKVLEHLNICKSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
KKASEGGILFALEKFHIV
>Mature_258_residues
MYKVVFFDVDGTLLSEIDRSMHESTKEAIRRLIDKGIHVVVTTGRPYSLCSQFNALGINTIISANGAHIKCGETVIHKSV
LSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAADNGRVMQALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLE
RYPALTFERFHGYVMNVLEDNKISKVTAIQKVLEHLNICKSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
KKASEGGILFALEKFHIV

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=268, Percent_Identity=27.9850746268657, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28734; Mature: 28734

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKVVFFDVDGTLLSEIDRSMHESTKEAIRRLIDKGIHVVVTTGRPYSLCSQFNALGINT
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCHH
IISANGAHIKCGETVIHKSVLSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAADNGRVM
EEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCHHH
QALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLERYPALTFERFHGYVMNVLED
HHHHHHHCCCCCCCHHCCCCHHHEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
NKISKVTAIQKVLEHLNICKSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
CCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCEEEECCCCHHHHHHHHHHH
KKASEGGILFALEKFHIV
HCCCCCCEEEEEECEECC
>Mature Secondary Structure
MYKVVFFDVDGTLLSEIDRSMHESTKEAIRRLIDKGIHVVVTTGRPYSLCSQFNALGINT
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCHH
IISANGAHIKCGETVIHKSVLSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAADNGRVM
EEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCHHH
QALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLERYPALTFERFHGYVMNVLED
HHHHHHHCCCCCCCHHCCCCHHHEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
NKISKVTAIQKVLEHLNICKSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
CCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCEEEECCCCHHHHHHHHHHH
KKASEGGILFALEKFHIV
HCCCCCCEEEEEECEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]