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The map label for this gene is yjiA [H]

Identifier: 218903172

GI number: 218903172

Start: 1957449

End: 1958399

Strand: Direct

Name: yjiA [H]

Synonym: BCAH820_2056

Alternate gene names: 218903172

Gene position: 1957449-1958399 (Clockwise)

Preceding gene: 218903170

Following gene: 218903174

Centisome position: 36.91

GC content: 34.07

Gene sequence:

>951_bases
ATGATTCCAGTAACAATATTAACTGGTTTTCTTGGATCTGGGAAAACAACATTATTAAATCGTATTTTAACAGAGAATCA
CGGTCAGAAATTAGCGGTGATCGTAAATGAAATCGGGCAAATTGGTATTGATAATCAGTTGATTATGAATGTTGAAGAAG
AAATTATGGAAATGACAAACGGCTGTTTATGCTGTACTGTGCGGGAAGATTTACTCGTTGCGTTAAAACAATTACTGGAT
GTAAAAGCAGAAGGTAAAATGGACTTTGATGGATTAGTAATTGAAACAACTGGTCTTGCAAATCCAGGTCCTATTATTCA
AACATTCTTTTTAGATCCTGTTATTCAATCTGCATACCAAATTAACGGTGTTGTAACAGTAGTAGATAGTTATCATATAC
ATAAACATTTTGAAAAAGGACTAGAAGCAAAAGAACAAATTGCATTTGCCGATGTTATATTAGTGAATAAGTTAGATTTA
ATTGAAGAGAGCGAAAAAGAAAACCTCTTACATGAACTGCAAGGAATAAACCCGACTGCAAAGTTAATTCAGTCGACTCA
CTGTGATGTAGATATTCCATCGTTATTAAAAATTCAAACGTTTAAAACGAAAGATACGTTACAAATTTATCCTCATAAAG
AGCATAATCATCTAGAAGGTGTAAAATCGTTTGTACTACGTGAAGAGCGTCCGTTAGATTTACAAAAACTAAATGAGTGG
ATGTCAGCTGTCGTTCAAGAACTGGGAGAATACTTATATCGCTACAAAGGAATTTTATCGATTGATGGAGTGGATAAACG
TATCGTTTTTCAAGGTGTACATACGCTATTTGCTGCTTCGTATGATAGAGAGTGGCAAGAGGGCGAAGATCGAGTAAGTG
AAGTTGTTTTCATCGGAAAAGATATTAATAAAGAATGGTTCCAAGAACATTTTGAGGAGTGTGTGAAATAA

Upstream 100 bases:

>100_bases
AGTTAGAGGGGCGTACAAACAATAAATATGTTTTGCTACAAAAACGATTATTTCTATATGTTATAATGTAAAAACATATA
GCTATAAGGAGATGTACGAA

Downstream 100 bases:

>100_bases
GTCTGCGTTTACTGCAGGCTTATTTTTTGGACTTAACTAAGTGTTTTGTAGAAAAATGATAGATTGCAAAAAACGAAGGA
TAATAAAAAAGCCTGTTTTC

Product: cobalamin synthesis protein/P47K family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQLLD
VKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDL
IEESEKENLLHELQGINPTAKLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECVK

Sequences:

>Translated_316_residues
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQLLD
VKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDL
IEESEKENLLHELQGINPTAKLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECVK
>Mature_316_residues
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQLLD
VKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDL
IEESEKENLLHELQGINPTAKLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECVK

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI148727351, Length=343, Percent_Identity=33.5276967930029, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI33469141, Length=342, Percent_Identity=32.4561403508772, Blast_Score=174, Evalue=7e-44,
Organism=Homo sapiens, GI126722884, Length=343, Percent_Identity=33.2361516034985, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI146231952, Length=336, Percent_Identity=32.1428571428571, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI223941779, Length=332, Percent_Identity=32.5301204819277, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI223941776, Length=333, Percent_Identity=31.8318318318318, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI119120938, Length=320, Percent_Identity=31.875, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI310124603, Length=227, Percent_Identity=25.9911894273128, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI310124599, Length=192, Percent_Identity=26.5625, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI87082430, Length=318, Percent_Identity=40.8805031446541, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI1788499, Length=193, Percent_Identity=32.6424870466321, Blast_Score=90, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6324356, Length=361, Percent_Identity=30.4709141274238, Blast_Score=129, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 35916; Mature: 35916

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTN
CCCHHEEHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQ
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
INGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDLIEESEKENLLHELQGINPTA
HCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
HHHHHCCCCCCCCHHHEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGK
HHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECC
DINKEWFQEHFEECVK
CCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIPVTILTGFLGSGKTTLLNRILTENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTN
CCCHHEEHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQ
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
INGVVTVVDSYHIHKHFEKGLEAKEQIAFADVILVNKLDLIEESEKENLLHELQGINPTA
HCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKLNEW
HHHHHCCCCCCCCHHHEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGK
HHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECC
DINKEWFQEHFEECVK
CCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]