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The map label for this gene is fliM [H]

Identifier: 218902877

GI number: 218902877

Start: 1666643

End: 1667629

Strand: Direct

Name: fliM [H]

Synonym: BCAH820_1760

Alternate gene names: 218902877

Gene position: 1666643-1667629 (Clockwise)

Preceding gene: 218902876

Following gene: 218902878

Centisome position: 31.43

GC content: 37.89

Gene sequence:

>987_bases
ATGAGTGGCGAAAAATTAAGCCAAGAGCAAATTGATGCCCTGCTGAAGGCGGTAAATGAAGGCGAGGAAATGCCAGCTTT
CGCACAAGAAGCAGGAAAGCAAGAGAAATTTCAAGAGTATGATTTTAATAGACCGGAGAAGTTCGGTGTTGAGCATTTAC
GTAGCTTGCAAGCAATTGCTTCTACATTTGGTAAACAGACGTCACAGACGTTGTCAGCGCGTATGCGTATTCCGATTGAG
TTAGAGCCTTCAACGGTTGAGCAAGTTCCGTTTACGAGTGAGTATGTGGAGAAAATGCCGAAAGATTATTATTTATATTG
TGTTATTGATCTTGGCCTTCCAGAGCTTGGGGAAATTGTTATTGAGATTGATTTAGCGTTCGTTATTTATATTCATGAAT
GTTGGCTTGGCGGAGATAGTAAGCGTAACTTTACGATGCGCAGACCACTTACCGCATTTGAGTTTTTAACATTGGATAAT
ATTTTTATGCTCCTTTGCAAAAATTTAGAGCAATCATTTGAAAGCGTTGTTGCGATTGAACCGAAATTTGTAACAACGGA
GACAGACCCGAATGCATTAAAGATTACGACAGCAAGCGATATCATTTCATTACTAAACGTAAATATGAAAACGGATTTTT
GGAATACGACAGTGCGCATCGGAATTCCATTCTTATCTGTTGAAGAAATTATGGATAAGTTAACATCTGAAAATATTGTT
GAACATTCTTCAGATAAACGTAAGAAGTATACGTCTGAAGTGGAAGTGAAAGTAAATCAAGTGTACAAACCTGTTCATGT
TGCAATTGGTGAGCAGAAGATGACAATGGGCGAGATTGAACAAATTGAAGAAGGCGATATTATTCCGCTCCATACGAAAG
TTTCGGATGAATTACTTGGTTATGTAGATGGAAAGCATAAATTTAATTGTTTTATTGGAAAAGATGGAACGCGTAAGGCG
CTCTTATTTAAAAGTTTTGTAGAGTAG

Upstream 100 bases:

>100_bases
TGCTTGAGAACGAAGAGATTGGAACCGGAAAGATTTTGACGAAAAACGGGAAGATGTACGTTGAAATCGTTGAATTGAAA
AGGTAGGGAAGGGGATTGTC

Downstream 100 bases:

>100_bases
GAGGATCCATATGAAGCATGAAGTATCTCCTGTGTCATTAATGGGATTAGAAGATTTTGCAGGAAAGCGAAATGAAGCAA
GTAAAGCACATATTGATACT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSGEKLSQEQIDALLKAVNEGEEMPAFAQEAGKQEKFQEYDFNRPEKFGVEHLRSLQAIASTFGKQTSQTLSARMRIPIE
LEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIVIEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDN
IFMLLCKNLEQSFESVVAIEPKFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIV
EHSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLGYVDGKHKFNCFIGKDGTRKA
LLFKSFVE

Sequences:

>Translated_328_residues
MSGEKLSQEQIDALLKAVNEGEEMPAFAQEAGKQEKFQEYDFNRPEKFGVEHLRSLQAIASTFGKQTSQTLSARMRIPIE
LEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIVIEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDN
IFMLLCKNLEQSFESVVAIEPKFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIV
EHSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLGYVDGKHKFNCFIGKDGTRKA
LLFKSFVE
>Mature_327_residues
SGEKLSQEQIDALLKAVNEGEEMPAFAQEAGKQEKFQEYDFNRPEKFGVEHLRSLQAIASTFGKQTSQTLSARMRIPIEL
EPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIVIEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDNI
FMLLCKNLEQSFESVVAIEPKFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIVE
HSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLGYVDGKHKFNCFIGKDGTRKAL
LFKSFVE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37404; Mature: 37273

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGEKLSQEQIDALLKAVNEGEEMPAFAQEAGKQEKFQEYDFNRPEKFGVEHLRSLQAIA
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
STFGKQTSQTLSARMRIPIELEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIV
HHHCCHHHHHHHHHEEEEEEECCCCHHCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCEE
IEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDNIFMLLCKNLEQSFESVVAIE
EEEHHHHEEEEHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
PKFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIV
CEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
EHSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLG
HCCCHHHHHCCHHHEEEHHHHCCCHHEEECCCCCCHHHHHHCCCCCEEEEECCHHHHHHH
YVDGKHKFNCFIGKDGTRKALLFKSFVE
HCCCCEEEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SGEKLSQEQIDALLKAVNEGEEMPAFAQEAGKQEKFQEYDFNRPEKFGVEHLRSLQAIA
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
STFGKQTSQTLSARMRIPIELEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIV
HHHCCHHHHHHHHHEEEEEEECCCCHHCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCEE
IEIDLAFVIYIHECWLGGDSKRNFTMRRPLTAFEFLTLDNIFMLLCKNLEQSFESVVAIE
EEEHHHHEEEEHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
PKFVTTETDPNALKITTASDIISLLNVNMKTDFWNTTVRIGIPFLSVEEIMDKLTSENIV
CEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
EHSSDKRKKYTSEVEVKVNQVYKPVHVAIGEQKMTMGEIEQIEEGDIIPLHTKVSDELLG
HCCCHHHHHCCHHHEEEHHHHCCCHHEEECCCCCCHHHHHHCCCCCEEEEECCHHHHHHH
YVDGKHKFNCFIGKDGTRKALLFKSFVE
HCCCCEEEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]