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The map label for this gene is fliC [H]

Identifier: 218902874

GI number: 218902874

Start: 1663956

End: 1665299

Strand: Reverse

Name: fliC [H]

Synonym: BCAH820_1757

Alternate gene names: 218902874

Gene position: 1665299-1663956 (Counterclockwise)

Preceding gene: 218902894

Following gene: 218902873

Centisome position: 31.4

GC content: 37.72

Gene sequence:

>1344_bases
ATGAGAATTAACACAAACATTAATAGTTTACGTACGCAAGAATACATGCGTCAAAACCAAGCAAAAATGAGCAATTCTAT
GGACCGTTTATCAAGCGGTAAACGTATCAACAACGCTTCTGACGATGCAGCAGGTCTTGCAATCGCAACTCGTATGCGTG
CACGTGAAAGCGGTCTAAACGTAGCTGCTAACAACACACAAGATGGTATGTCATTAATCCGTACAGCTGACTCAGCTTTA
GGATCTGTATCTAACATCTTACTTCGTATGCGTGACCTTGCAAACCAATCTGCAAACGGCACAAATACATCTGATAACCA
AGCTGCAATGCAAAAAGAATTTGCAGAACTACAAAAACAAATTACTTACATTGCAGATAACACTCAATTCAATGATAAAA
ACTTACTACAGTCTAATTCATCTATTAACATTCAAACATTAGACTCTTCAGATGGTAACCAACAAATTGGTATTGAATTA
AAATCTGCTTCTTTAAAATCTCTTGGAATTGAAGATTTAGCAATTGGTGCTTCTGTAAATCCACTTGCTAAGGCTACTGT
GGAAGCAAGTGAAGCTTACGACAAAGCGAAAGCTGATACTGCTGCTTTTGCTAAATCAATTGCAGATACGGCTGCTACTG
GTACTGGTGCTGCTAAAGCAGATGCAGCTGCGGTTGATGCATACATTAAAGAAGCTGACCCTACTGCAAAAGGCAATTTA
TACACTGGATTAACTGCTGATCAAAAAAAATTAGCAGATGAGCATAATACATTAAAAGCTGCTGAAGATGGAAAAAAAGC
TGAGCTGACTATGGCTACAACTAAATCAACAGCTGATGGTACTGCTAAAGGATTAGTTGACGCGTATGATAATGCTAAAT
CTGATGCTATGAATGATCCTAAAGCTAAAGCATACCTTGAAGCTAAAATGGCTTATGAAAAAGACACAAGTAATGTAGCT
AATAAGCAAAAATTAGACTCTACTAAAGAAGCAATGGAAAAAGATCCAGCTTCTAAAGACTTAGTTGTAAAATTAGATGC
TGCTAAAGCTGCTGCTACAAATGGTACTCCACTAGATGCGGTAAGTAAAATTGATGCTGCGTTAAAAACAGTTGCTGACA
ACCGTGCAACTTTAGGTGCTACATTAAACCGTCTAGACTTTAACGTAAACAACCTTAAGAGCCAATCTTCTTCTATGGCT
TCAGCTGCTTCTCAAATCGAAGACGCTGACATGGCGAAAGAAATGTCTGAAATGACTAAGTTCAAAATCTTGAACGAAGC
TGGTATCAGCATGCTTTCTCAAGCAAACCAAACTCCACAAATGGTTTCTAAATTATTACAATAA

Upstream 100 bases:

>100_bases
CTATGACAGGGATTACAATAAATCTCGAAATTGATTTTTTCGCATATTACCGTTTTTCAATTTGCAGAAAAGTCAATATA
AAAAAATGGGGGTTCTTAAC

Downstream 100 bases:

>100_bases
TCCATTTGAGTTAGTTTCCTGAATAAACCTCTCTGCTTGCGGAGAGGTTTATTTTTTGTAAAACCTTTCTTTTTTTAGGT
GGAAGAGAGCATCCGCGTGG

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MRINTNINSLRTQEYMRQNQAKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAANNTQDGMSLIRTADSAL
GSVSNILLRMRDLANQSANGTNTSDNQAAMQKEFAELQKQITYIADNTQFNDKNLLQSNSSINIQTLDSSDGNQQIGIEL
KSASLKSLGIEDLAIGASVNPLAKATVEASEAYDKAKADTAAFAKSIADTAATGTGAAKADAAAVDAYIKEADPTAKGNL
YTGLTADQKKLADEHNTLKAAEDGKKAELTMATTKSTADGTAKGLVDAYDNAKSDAMNDPKAKAYLEAKMAYEKDTSNVA
NKQKLDSTKEAMEKDPASKDLVVKLDAAKAAATNGTPLDAVSKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSSSMA
SAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ

Sequences:

>Translated_447_residues
MRINTNINSLRTQEYMRQNQAKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAANNTQDGMSLIRTADSAL
GSVSNILLRMRDLANQSANGTNTSDNQAAMQKEFAELQKQITYIADNTQFNDKNLLQSNSSINIQTLDSSDGNQQIGIEL
KSASLKSLGIEDLAIGASVNPLAKATVEASEAYDKAKADTAAFAKSIADTAATGTGAAKADAAAVDAYIKEADPTAKGNL
YTGLTADQKKLADEHNTLKAAEDGKKAELTMATTKSTADGTAKGLVDAYDNAKSDAMNDPKAKAYLEAKMAYEKDTSNVA
NKQKLDSTKEAMEKDPASKDLVVKLDAAKAAATNGTPLDAVSKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSSSMA
SAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ
>Mature_447_residues
MRINTNINSLRTQEYMRQNQAKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAANNTQDGMSLIRTADSAL
GSVSNILLRMRDLANQSANGTNTSDNQAAMQKEFAELQKQITYIADNTQFNDKNLLQSNSSINIQTLDSSDGNQQIGIEL
KSASLKSLGIEDLAIGASVNPLAKATVEASEAYDKAKADTAAFAKSIADTAATGTGAAKADAAAVDAYIKEADPTAKGNL
YTGLTADQKKLADEHNTLKAAEDGKKAELTMATTKSTADGTAKGLVDAYDNAKSDAMNDPKAKAYLEAKMAYEKDTSNVA
NKQKLDSTKEAMEKDPASKDLVVKLDAAKAAATNGTPLDAVSKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSSSMA
SAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=173, Percent_Identity=41.6184971098266, Blast_Score=121, Evalue=8e-29,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 47351; Mature: 47351

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRINTNINSLRTQEYMRQNQAKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLN
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
VAANNTQDGMSLIRTADSALGSVSNILLRMRDLANQSANGTNTSDNQAAMQKEFAELQKQ
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ITYIADNTQFNDKNLLQSNSSINIQTLDSSDGNQQIGIELKSASLKSLGIEDLAIGASVN
HHHHCCCCCCCCHHHHHCCCCEEEEEECCCCCCCEEEEEEECCHHHHCCCHHHCCCCCCC
PLAKATVEASEAYDKAKADTAAFAKSIADTAATGTGAAKADAAAVDAYIKEADPTAKGNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCE
YTGLTADQKKLADEHNTLKAAEDGKKAELTMATTKSTADGTAKGLVDAYDNAKSDAMNDP
EECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHCCCCCC
KAKAYLEAKMAYEKDTSNVANKQKLDSTKEAMEKDPASKDLVVKLDAAKAAATNGTPLDA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCHHH
VSKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTK
HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKILNEAGISMLSQANQTPQMVSKLLQ
HHHHHHHHHHHHHHCCCCHHHHHHHHC
>Mature Secondary Structure
MRINTNINSLRTQEYMRQNQAKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLN
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
VAANNTQDGMSLIRTADSALGSVSNILLRMRDLANQSANGTNTSDNQAAMQKEFAELQKQ
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ITYIADNTQFNDKNLLQSNSSINIQTLDSSDGNQQIGIELKSASLKSLGIEDLAIGASVN
HHHHCCCCCCCCHHHHHCCCCEEEEEECCCCCCCEEEEEEECCHHHHCCCHHHCCCCCCC
PLAKATVEASEAYDKAKADTAAFAKSIADTAATGTGAAKADAAAVDAYIKEADPTAKGNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCE
YTGLTADQKKLADEHNTLKAAEDGKKAELTMATTKSTADGTAKGLVDAYDNAKSDAMNDP
EECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHCCCCCC
KAKAYLEAKMAYEKDTSNVANKQKLDSTKEAMEKDPASKDLVVKLDAAKAAATNGTPLDA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCHHH
VSKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTK
HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKILNEAGISMLSQANQTPQMVSKLLQ
HHHHHHHHHHHHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2123866; 9620973; 7682214 [H]