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The map label for this gene is fliD [H]

Identifier: 218902855

GI number: 218902855

Start: 1647354

End: 1648733

Strand: Direct

Name: fliD [H]

Synonym: BCAH820_1738

Alternate gene names: 218902855

Gene position: 1647354-1648733 (Clockwise)

Preceding gene: 218902854

Following gene: 218902856

Centisome position: 31.07

GC content: 33.55

Gene sequence:

>1380_bases
ATGGCAGGAACGATAACAGGCATTGGCGGTAGACAACAGATTTGGAATCTAGGAAATAATATGATCGATACTTCTAACTT
CGTTGAATTAGAAATGAATGCGTTAGATATGAGAAAAACGCCGTATACAACTGAAAAGAATAGTCTTTCACAAGATAAAC
TATTATATACAAGTTTAAAATCAGAATTTAGCTCTTTTACGCAAACTTTTAAAAACTTAGCGGCTTTTAAAGGGAATGAG
AAAAAAGTAACGACAACGCAAGATGGTTATATAAATGTAAAAGCTGATGGTGGTGCGATTGCCGGCACTTTTAATATGAC
GATTACACAACTTGCGCAGCGTCATCAAATAGCTTCTGATGAAATTAAAGATATAAATGCAAAGCTGAATAGAGATGAAA
CATTAAAACTAGGTGGTAAAGAACTAAAAGTAACATCTGATATGACATATAAAGATTTAATTAATAAAATTAATGATGGA
GATTACGGTGTATCAGCTTATACGCTTGGAAATAAAATTTTTATGACCTCAAAAAAAGAGGGAGAAGATGGAGTAATTAA
TTTTAAGGACAATACATCTACATTGTTTCAAGATATAGGGTTAGCTAATAAGGATGGTGAAGCGATTAATGTAATCAATA
AAGCGCAAAATGCTGAATATACGATTAATGGTATCGAAGGCAAGAGCTCTACCAATACAATTGAAACACTTCCAGGTGTG
AAAATTGAATTATTGAAAGTAACTGAGCCGAAAGTAGAAGGAACATCAGATGCAGGTACAACAACAGAACCAAAAGCAAA
AGGGATAGATCTAAAATTCACAGTAAGTGATTCAAACGTAACAGACGCATCAAATATTATTAAAAAGATGGTTGCGGATT
ATAATAAAGCTGTTTCTACAGTAGATATCTTTGCTGGTAAAGGCGGGGCGTTCCAAGGTCAAGCTATTATGCAAAGTGTA
CGCCAAGCGATGAATAGCGTCGTAACATTTTCTCAAGATGGTAATTACTTATTCTCATTTGGTATTCAATTAAAGCAAGA
TGGAACGATGGAAGTTAATGACGAAGCATTAACGAAAGCGTTAAAAGAAAAACCGGATGCAGCGAAGCAATTTTTCTTTA
GTTCTAACGGTTTAGGAAAAATGATGGAAGAGCCACTTGATAAGTTATTTGGTGATAAAGGTGTAGTCGGAGAGAGAGTA
AAAAGCATTGACTCACGTGTAAGTGATTTAGATAAAAAGATTAAAGATATTGAGACGCAAAACTTGCAAAAACAAGATGA
AATTGTGAAGAAGTATCAAAAACTAGAAAGTACATTAGCAGCGCTAGATAGCCAATTAAAAACAATTAAAGCAATGACAA
AACAAAAAAGTGATGATTAA

Upstream 100 bases:

>100_bases
GCGTATATTAATGCGACGTATGAAGCTACGCTTAAAGCGGTTAGCACGATGAGTAAAACGAGTATTTTAGACTACATGTA
AAGAATAAGGAGTGAGAAAT

Downstream 100 bases:

>100_bases
TGAAAGGTAAGGAAGTGATTGTATGCAAGCATGGCAACGTTATATGCAAAATGATATTATGACGAGTAACCCAATTAAAA
ATACAATTTTTATTTATGAA

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MAGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNE
KKVTTTQDGYINVKADGGAIAGTFNMTITQLAQRHQIASDEIKDINAKLNRDETLKLGGKELKVTSDMTYKDLINKINDG
DYGVSAYTLGNKIFMTSKKEGEDGVINFKDNTSTLFQDIGLANKDGEAINVINKAQNAEYTINGIEGKSSTNTIETLPGV
KIELLKVTEPKVEGTSDAGTTTEPKAKGIDLKFTVSDSNVTDASNIIKKMVADYNKAVSTVDIFAGKGGAFQGQAIMQSV
RQAMNSVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERV
KSIDSRVSDLDKKIKDIETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD

Sequences:

>Translated_459_residues
MAGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNE
KKVTTTQDGYINVKADGGAIAGTFNMTITQLAQRHQIASDEIKDINAKLNRDETLKLGGKELKVTSDMTYKDLINKINDG
DYGVSAYTLGNKIFMTSKKEGEDGVINFKDNTSTLFQDIGLANKDGEAINVINKAQNAEYTINGIEGKSSTNTIETLPGV
KIELLKVTEPKVEGTSDAGTTTEPKAKGIDLKFTVSDSNVTDASNIIKKMVADYNKAVSTVDIFAGKGGAFQGQAIMQSV
RQAMNSVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERV
KSIDSRVSDLDKKIKDIETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
>Mature_458_residues
AGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNEK
KVTTTQDGYINVKADGGAIAGTFNMTITQLAQRHQIASDEIKDINAKLNRDETLKLGGKELKVTSDMTYKDLINKINDGD
YGVSAYTLGNKIFMTSKKEGEDGVINFKDNTSTLFQDIGLANKDGEAINVINKAQNAEYTINGIEGKSSTNTIETLPGVK
IELLKVTEPKVEGTSDAGTTTEPKAKGIDLKFTVSDSNVTDASNIIKKMVADYNKAVSTVDIFAGKGGAFQGQAIMQSVR
QAMNSVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVK
SIDSRVSDLDKKIKDIETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 50324; Mature: 50193

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLK
CCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHH
SEFSSFTQTFKNLAAFKGNEKKVTTTQDGYINVKADGGAIAGTFNMTITQLAQRHQIASD
HHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHH
EIKDINAKLNRDETLKLGGKELKVTSDMTYKDLINKINDGDYGVSAYTLGNKIFMTSKKE
HHHHHHHHCCCCCEEECCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEECCEEEEECCCC
GEDGVINFKDNTSTLFQDIGLANKDGEAINVINKAQNAEYTINGIEGKSSTNTIETLPGV
CCCCEEEECCCHHHHHHHCCCCCCCCCEEHHHHHCCCCEEEEECCCCCCCCCCHHHCCCC
KIELLKVTEPKVEGTSDAGTTTEPKAKGIDLKFTVSDSNVTDASNIIKKMVADYNKAVST
EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHE
VDIFAGKGGAFQGQAIMQSVRQAMNSVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKA
EEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCEEECHHHHHHH
LKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVKSIDSRVSDLDKKIKDIETQ
HHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGTITGIGGRQQIWNLGNNMIDTSNFVELEMNALDMRKTPYTTEKNSLSQDKLLYTSLK
CCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHH
SEFSSFTQTFKNLAAFKGNEKKVTTTQDGYINVKADGGAIAGTFNMTITQLAQRHQIASD
HHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHH
EIKDINAKLNRDETLKLGGKELKVTSDMTYKDLINKINDGDYGVSAYTLGNKIFMTSKKE
HHHHHHHHCCCCCEEECCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEECCEEEEECCCC
GEDGVINFKDNTSTLFQDIGLANKDGEAINVINKAQNAEYTINGIEGKSSTNTIETLPGV
CCCCEEEECCCHHHHHHHCCCCCCCCCEEHHHHHCCCCEEEEECCCCCCCCCCHHHCCCC
KIELLKVTEPKVEGTSDAGTTTEPKAKGIDLKFTVSDSNVTDASNIIKKMVADYNKAVST
EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHE
VDIFAGKGGAFQGQAIMQSVRQAMNSVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKA
EEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCEEECHHHHHHH
LKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVKSIDSRVSDLDKKIKDIETQ
HHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]