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The map label for this gene is ypeP [H]

Identifier: 218902811

GI number: 218902811

Start: 1610711

End: 1611370

Strand: Direct

Name: ypeP [H]

Synonym: BCAH820_1694

Alternate gene names: 218902811

Gene position: 1610711-1611370 (Clockwise)

Preceding gene: 218902810

Following gene: 218902812

Centisome position: 30.38

GC content: 34.39

Gene sequence:

>660_bases
ATGAAATATAAAATTCATTGGTTGTATAAAACGAAGCGCGGATTGCAGACGGAATTAACGACAGATTATATGAACATAGA
AGATGTACTGCAATTTGCAGAGGATTTCGAGAAAACAGGAAGAGTAAAAGAATTTTCATTTTATGATGAACTGGATACAG
AATGGTCATTAAAAGAGATGAAAAAGTTAAGTAAGCAAGTAGAGGAAGAACTCCAAGAAATACTCGTTTATTTTGATGGT
GGTTATGATGTACAGACGAAAGAAGCTGGGGTAGGTATATGTGTATACTATAAAAAAGGAAATGCAAAATACCGAATTCG
CCGTAATGCATATATAGAAGGCATATATGATAATAATGAAGCGGAATACGCATCATTACTATATAGCATGAATATACTCG
AGGAATTAGGGATTAAGTATGAAGCAGTTACACTTCGCGGGGACTCTCAAGTTGTACTGCAACAATTGGCCGGAGAATGG
CCTTGTTATGATGAACATTTAAATCATTATTTAGACCAAATTGAGCAAAAAGCGAAGCAAATGAAATTAAAACTTGTATG
TGAGCCAATCTCTAGAAAACAAAATAAAGAAGCACATCAATTGGCAACGCAAGCATTAGAAGGAACAGTCATTGATAGTC
ATAAAGAAATAACCGAATAG

Upstream 100 bases:

>100_bases
TTGAATATAATTCTGTGACTCTTGATAAAATATAATAAAATAAAGTGAGGCTTTCATTAGCTGGATACATATAAGAAGTC
TTACATAAGGGGAATCTAGT

Downstream 100 bases:

>100_bases
AGAGGTGCAACGGTGGATAAAAAGCAACTCATTACAGAGGTAAATGACTTATTAGAAACGTATTGTGAAGGATGTTTTTT
GCGAGAACATAATCGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKYKIHWLYKTKRGLQTELTTDYMNIEDVLQFAEDFEKTGRVKEFSFYDELDTEWSLKEMKKLSKQVEEELQEILVYFDG
GYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE

Sequences:

>Translated_219_residues
MKYKIHWLYKTKRGLQTELTTDYMNIEDVLQFAEDFEKTGRVKEFSFYDELDTEWSLKEMKKLSKQVEEELQEILVYFDG
GYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE
>Mature_219_residues
MKYKIHWLYKTKRGLQTELTTDYMNIEDVLQFAEDFEKTGRVKEFSFYDELDTEWSLKEMKKLSKQVEEELQEILVYFDG
GYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002156 [H]

Pfam domain/function: PF00075 RnaseH [H]

EC number: 3.1.26.4

Molecular weight: Translated: 25752; Mature: 25752

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKIHWLYKTKRGLQTELTTDYMNIEDVLQFAEDFEKTGRVKEFSFYDELDTEWSLKEM
CCEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCHHHH
KKLSKQVEEELQEILVYFDGGYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNE
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCEEEEEECCCH
AEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE
HHHHHEECHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC
>Mature Secondary Structure
MKYKIHWLYKTKRGLQTELTTDYMNIEDVLQFAEDFEKTGRVKEFSFYDELDTEWSLKEM
CCEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCHHHH
KKLSKQVEEELQEILVYFDGGYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNE
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCEEEEEECCCH
AEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE
HHHHHEECHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]