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The map label for this gene is ydbT [H]

Identifier: 218902258

GI number: 218902258

Start: 1085833

End: 1087257

Strand: Direct

Name: ydbT [H]

Synonym: BCAH820_1140

Alternate gene names: 218902258

Gene position: 1085833-1087257 (Clockwise)

Preceding gene: 218902257

Following gene: 218902259

Centisome position: 20.48

GC content: 36.91

Gene sequence:

>1425_bases
ATGTTATTAGAATTAAAAATAAGAGATTTTATACCATTTATTATTTTTCTCCTTAGTTTAAAAGGAAAATTCCCATTTTG
GTATTTAGTTCCTATCGGTTTTGCGGTAATCACGATTGTTTCAGCTATCGTAGGCTGGTATTACAAAGTATATTGGATTG
AAAATAACGTATTACATGTGAAACAAGGTCTCTTTGTGAAGAAGGAGAGCTACTTAAATAAAGAACGTGTTCAAACAATC
AATACAAGCTCTAACGTGTTATATCAAATGCTTGGCTTAAAGAAAATCCAAATTGAAACAGCTGGCGGGGGCGATGATGC
GGAGGTTAGCTTAGCTGGTATTACAGTAGAAGAGGCAACTGAGCTTATTGCTTTGCTAAATGAGCCAACTCCAGAAGTGA
AAGCAGAAGGAACGCTAGACGAAAAAGCGGAACATGCAATAGAAAAAGAAATCGTTACAGAAGAAAAACAAACGACAGAA
TATAAATTGACTTGGAAAGAAATTTTACTAGCCTCTGTTACATCGGGTCAGTTTGGGCTATTATTCTCGTTAATCTTTTT
CGTGTATCACCAAGTAGAGGAGTACATTCCGAAATGGATAGAGAATAGCGTAAAGTCGTATGTAATGGAATATGATATAT
ACGGCTGGATTTTCATGGTAGTTATTTTGCTCGTCCTTTCGTGGATTATATCTACAATCGGTTATGCGCTAAAACATGGA
GATTTCACAGTAAATCGAAGAAATGACGAAGTCCGCATTTCACAAGGATTACTTGAGAAAAAAGAACTCGTCTTAAAGTT
ACATCGTATTCAAGGAATTACGATAAAAGAAAGTATTTTACGTCAGCCATTCGGCTATTGTGCTGTGCAAGTAGAAGTGA
TTCAAAGTAAGGGAACGGATGACGAAAAAGAAAAAGTTACACTGCACCCAATCATTCGAAAAGATCGAGTACAACAGTTA
CTCGGGCATTTACAATTACCATACGAACTGGATACAAATATTATTTCATTACCAAAAGCAGCATTACGCCGCTATCTCAT
TGATAGCTTCATCTTTTTCGCAATGCTAGCTATCCCGCTTATTGGAATAAGTATATACTTTGAAAAGCACTTCATCATGT
GGGCACTAATTCCGCTCACGATCCTCATCTTTACACTTGGTTACGCAACATTTAAAACAAATGGTTACAGTGTAAACGGA
GAGCAAATTACACTTGTATATCGCAGCGTCGGAAAATATACAGGACTTATTAGAAGAAGACACGTCCAATCGATGGAAAA
GACGCAATCCTATTTCCAGCGCCGCGCGGATTTATGTACGTATAAGTTTTCGAGCGCATCATCGAGTTATAAATTAGAGC
ATACGAGAGTAGAAGATGCGGAGAGAATGCAGAATTGGTATAAGAAGAGAATAAGTGAGAATTAA

Upstream 100 bases:

>100_bases
CCAGGCTTAACGATGTATGAAGCAGAAATGTTGAAAACGAAAATCGCAGAATTAGCGAAAGTGAGTGATGAGGATGTATA
AGAGACAGCATCCGATCACG

Downstream 100 bases:

>100_bases
GTGGAATGGCTCGTCTTTTGCGGAAGGCGAGTTATTTTTCTATGTAAAAATGATAGGAAATAATGAATAATATATGTGAC
GCAAAAAAAGTGAGGTGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MLLELKIRDFIPFIIFLLSLKGKFPFWYLVPIGFAVITIVSAIVGWYYKVYWIENNVLHVKQGLFVKKESYLNKERVQTI
NTSSNVLYQMLGLKKIQIETAGGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQTTE
YKLTWKEILLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMEYDIYGWIFMVVILLVLSWIISTIGYALKHG
DFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKGTDDEKEKVTLHPIIRKDRVQQL
LGHLQLPYELDTNIISLPKAALRRYLIDSFIFFAMLAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNG
EQITLVYRSVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRVEDAERMQNWYKKRISEN

Sequences:

>Translated_474_residues
MLLELKIRDFIPFIIFLLSLKGKFPFWYLVPIGFAVITIVSAIVGWYYKVYWIENNVLHVKQGLFVKKESYLNKERVQTI
NTSSNVLYQMLGLKKIQIETAGGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQTTE
YKLTWKEILLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMEYDIYGWIFMVVILLVLSWIISTIGYALKHG
DFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKGTDDEKEKVTLHPIIRKDRVQQL
LGHLQLPYELDTNIISLPKAALRRYLIDSFIFFAMLAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNG
EQITLVYRSVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRVEDAERMQNWYKKRISEN
>Mature_474_residues
MLLELKIRDFIPFIIFLLSLKGKFPFWYLVPIGFAVITIVSAIVGWYYKVYWIENNVLHVKQGLFVKKESYLNKERVQTI
NTSSNVLYQMLGLKKIQIETAGGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQTTE
YKLTWKEILLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMEYDIYGWIFMVVILLVLSWIISTIGYALKHG
DFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKGTDDEKEKVTLHPIIRKDRVQQL
LGHLQLPYELDTNIISLPKAALRRYLIDSFIFFAMLAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNG
EQITLVYRSVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRVEDAERMQNWYKKRISEN

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 54912; Mature: 54912

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLELKIRDFIPFIIFLLSLKGKFPFWYLVPIGFAVITIVSAIVGWYYKVYWIENNVLHV
CEEEEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEE
KQGLFVKKESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGDDAEVSLAGITVEEAT
CCCCEEEHHHHCCHHHHHEECCHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCHHHHH
ELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQTTEYKLTWKEILLASVTSGQFGL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCEEEEHHHHHHHHCCCCCHHH
LFSLIFFVYHQVEEYIPKWIENSVKSYVMEYDIYGWIFMVVILLVLSWIISTIGYALKHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKGTD
CEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCCHHEEEEEEEECCCCC
DEKEKVTLHPIIRKDRVQQLLGHLQLPYELDTNIISLPKAALRRYLIDSFIFFAMLAIPL
CCHHCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
IGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNGEQITLVYRSVGKYTGLIRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCEEEEEEHHHHHHHHHHHHH
HVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRVEDAERMQNWYKKRISEN
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLELKIRDFIPFIIFLLSLKGKFPFWYLVPIGFAVITIVSAIVGWYYKVYWIENNVLHV
CEEEEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEE
KQGLFVKKESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGDDAEVSLAGITVEEAT
CCCCEEEHHHHCCHHHHHEECCHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCHHHHH
ELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQTTEYKLTWKEILLASVTSGQFGL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCEEEEHHHHHHHHCCCCCHHH
LFSLIFFVYHQVEEYIPKWIENSVKSYVMEYDIYGWIFMVVILLVLSWIISTIGYALKHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKGTD
CEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCCHHEEEEEEEECCCCC
DEKEKVTLHPIIRKDRVQQLLGHLQLPYELDTNIISLPKAALRRYLIDSFIFFAMLAIPL
CCHHCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
IGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNGEQITLVYRSVGKYTGLIRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCEEEEEEHHHHHHHHHHHHH
HVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRVEDAERMQNWYKKRISEN
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]