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The map label for this gene is yvsH [H]

Identifier: 218902059

GI number: 218902059

Start: 894888

End: 896312

Strand: Reverse

Name: yvsH [H]

Synonym: BCAH820_0941

Alternate gene names: 218902059

Gene position: 896312-894888 (Counterclockwise)

Preceding gene: 218902062

Following gene: 218902058

Centisome position: 16.9

GC content: 38.88

Gene sequence:

>1425_bases
ATGCAACAAAAAAAATGGGGCTTTTGGGTACTAACAGCTTTCGTTGTCGGTAATATGGTTGGCGCTGGGATTTTCATGGT
GCCAAGTACGTTGGCACAAACAGCAAGCCCTCTCGGTGTCACTTTAGCTTGGTTAACTACAGGGTTTGGTGTTTTAATGC
TAGCTCTTGTTTTCGGTAATTTAGCAATTCGTCGTCCTGATTTAACGACAGGACCACAAAGTCATGCATATGCTTTATTC
TCATCACCAAAAAAGAAAAAAATGGCTGGTTTCAGTATGGTATGGGGGTATTGGGTTGCAAACTGGGCAAGTAACGTTGC
CATCATTACATCATTTGCGGGATATTTATCACTCTTCTTCCCAATTATGAAAGATACACGACTACTATTTTCAATCGGTT
CGTTTAACGTAGAAGTCGGAAAACTAATTACATTTACGATTTGTTCCATCTTACTTTGGGGAACTCATATTATATTAACG
AATGGTGTAAGCGGAGCTGGAAAGCTAAACTTCTTAGCAACAACAACGAAAGTAACTGGATTCCTTTTATTCATCGTCGT
TACTTTATTTGCATTCGAAGCTTCTAAGTTTGGACAATGGTACACACCGATGATCGATAAATCAGGTGTATCACACGGCC
TTCTTTCACAAGTAAATTTAGCTGCTCTTACAACGCTTTGGGCATTTATCGGAATTGAATCAGCCGTTCTTTTATCAAAC
CGTGCTGTTTCTCCAAAAACAGTAAAACGTGCAACAGTTGCTGGATTACTTGTTACAGTTGCGATTTACTTAGGAATTAC
AATTTTAACAATGGGTGTACTTCACGTTGATAAATTACAAGCCTCAGAACGTCCGTTAGCAGATGCATTAAATGCTGCAA
TGGGTCACGGCGGCGGAAAACTGATGGCATTACTTGCTCTTACTTCCCTGTTCGGTTCGATTTTAGGCTGGATTTTATTA
AGCTCAGAAGTACCATATCAAGCAGCAAAAGAAGGTTTCTTCCCTTCCTTCTTCGCAAAAACAAACAAAAAAGGAAGTCC
AATTTATTCATTACGATTAACAAACATTATGTCGCAAGTGTTCTTATTCTCAACATTATCAGGAACAATTGCGGAAGCTT
ATACATTCGTTATTACCGTATCAACACTCGCCTATCTCATTCCATATCTCGTTTCACCAATCTTCCAGTTAAAACTAGTC
GCTACTGGTGAAACGTATAAAAATGAAATGCGGGCAAGAATTACTGACGGTATAGTTGCAGTAATTGCACTTTGCTACGC
ACTATGGGTTATTAAAACGGGTGCAGCCGATATAAAAACGTTCCTTCTCGGAATTGGTTTATTCGTAATCGGCTTTGCTT
TCTATCCATTAATGAATCGTGATCAGAAAAAAAATAACGAAAAGAAAAACGGGCAAGTTGCATAA

Upstream 100 bases:

>100_bases
ACGTGCTTTTTTTGTTTTGTTTGGGACTTCTCTTCTCTACTAAGAAGACATACATATCTCCTCGCATGACTTGGTTATAC
TAACTTTGGAGGTATTTTCT

Downstream 100 bases:

>100_bases
CGCAATTTGCTCGTTTTTTCTTTTGCAAAACATATATAATAGAACAAAGAGGTGAAAAACATGTCAATCGAATCACTATG
GAGCAGCCGTTTCCAACAAC

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGNLAIRRPDLTTGPQSHAYALF
SSPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILT
NGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
RAVSPKTVKRATVAGLLVTVAIYLGITILTMGVLHVDKLQASERPLADALNAAMGHGGGKLMALLALTSLFGSILGWILL
SSEVPYQAAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQVFLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLV
ATGETYKNEMRARITDGIVAVIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA

Sequences:

>Translated_474_residues
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGNLAIRRPDLTTGPQSHAYALF
SSPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILT
NGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
RAVSPKTVKRATVAGLLVTVAIYLGITILTMGVLHVDKLQASERPLADALNAAMGHGGGKLMALLALTSLFGSILGWILL
SSEVPYQAAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQVFLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLV
ATGETYKNEMRARITDGIVAVIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA
>Mature_474_residues
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGNLAIRRPDLTTGPQSHAYALF
SSPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILT
NGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
RAVSPKTVKRATVAGLLVTVAIYLGITILTMGVLHVDKLQASERPLADALNAAMGHGGGKLMALLALTSLFGSILGWILL
SSEVPYQAAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQVFLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLV
ATGETYKNEMRARITDGIVAVIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI33286428, Length=405, Percent_Identity=24.6913580246914, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI1787890, Length=474, Percent_Identity=31.4345991561181, Blast_Score=188, Evalue=7e-49,
Organism=Escherichia coli, GI2367353, Length=440, Percent_Identity=29.3181818181818, Blast_Score=159, Evalue=5e-40,
Organism=Escherichia coli, GI1790575, Length=403, Percent_Identity=24.317617866005, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786908, Length=398, Percent_Identity=24.1206030150754, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082250, Length=370, Percent_Identity=25.9459459459459, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51313; Mature: 51313

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGN
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
LAIRRPDLTTGPQSHAYALFSSPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFF
CEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
PIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILTNGVSGAGKLNFLATTTKVTG
HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEHHHHHH
FLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
RAVSPKTVKRATVAGLLVTVAIYLGITILTMGVLHVDKLQASERPLADALNAAMGHGGGK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH
LMALLALTSLFGSILGWILLSSEVPYQAAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCCCCEEEHHHHHHHHHH
FLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLVATGETYKNEMRARITDGIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHH
VIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGN
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
LAIRRPDLTTGPQSHAYALFSSPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFF
CEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
PIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILTNGVSGAGKLNFLATTTKVTG
HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEHHHHHH
FLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
RAVSPKTVKRATVAGLLVTVAIYLGITILTMGVLHVDKLQASERPLADALNAAMGHGGGK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH
LMALLALTSLFGSILGWILLSSEVPYQAAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCCCCEEEHHHHHHHHHH
FLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLVATGETYKNEMRARITDGIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHH
VIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]