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The map label for this gene is fecI [C]

Identifier: 218901842

GI number: 218901842

Start: 677135

End: 677692

Strand: Direct

Name: fecI [C]

Synonym: BCAH820_0703

Alternate gene names: 218901842

Gene position: 677135-677692 (Clockwise)

Preceding gene: 218901841

Following gene: 218901843

Centisome position: 12.77

GC content: 34.23

Gene sequence:

>558_bases
ATGAAAGTTACAAACAATGATTATGAAAAGATGGAAGAGCTATACGAGTTGTATGAACAAAAAGTTTATTATGTAGCGTA
TTCTATTTTAAATAATATTCAGCAGGCAGAAGATGCGGTTCAAGAGACGTTTATTACTCTTTATAAGAACTTGGAAAAGC
TCCATAGCTTGGCTACTCAAGAGCTTAAACGCTATATTTTGAGGGTCGCGAAAAATAAGGCGATTGATAGTTACCGGAAA
AATAAACGACATGAAACATTTTTAGAAGAATATGAAAGAGAATCAATAGAAGCAGTAGATGAAAATGTTGAAGAGTGGGA
AAAACGTGTAATGTCCGAGGTTCAAATTGATGCATTGTTAAAAGAGTTAAATGAGTCTAATAGACAGGTGTTTAAGTACA
AAGTCTTCTATAACTTAACGTATCAAGAAATTTCAAGTGTCATGGGGATAACGGAGGCTAATGTCCGCAAGCAATTTGAA
CGCGCTCGAAAACGAGTCCAAAATATGATAGGAGGTATACAACATGACGAATTCAAAGAACTCCAAAGAAATATATGA

Upstream 100 bases:

>100_bases
GGCTTTATTTATTTTATTATTAAATTTTATTTATAAATAGATTTTGTGGTGTCACAAAGTATATGGCTCATTCGTTATAT
AGAGTGAGAGGAGGAATCAT

Downstream 100 bases:

>100_bases
ACTTGCTGAAAAAATTGCTTTAGATGATTTTGATAAACTCGAAGAAAAACATGAATTTTCACATACATATACGCGCAAAA
AGAAATTGTTTATGGAAGAA

Product: RNA polymerase sigma factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKVTNNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLATQELKRYILRVAKNKAIDSYRK
NKRHETFLEEYERESIEAVDENVEEWEKRVMSEVQIDALLKELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE
RARKRVQNMIGGIQHDEFKELQRNI

Sequences:

>Translated_185_residues
MKVTNNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLATQELKRYILRVAKNKAIDSYRK
NKRHETFLEEYERESIEAVDENVEEWEKRVMSEVQIDALLKELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE
RARKRVQNMIGGIQHDEFKELQRNI
>Mature_185_residues
MKVTNNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLATQELKRYILRVAKNKAIDSYRK
NKRHETFLEEYERESIEAVDENVEEWEKRVMSEVQIDALLKELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE
RARKRVQNMIGGIQHDEFKELQRNI

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22371; Mature: 22371

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTNNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLATQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELKRYILRVAKNKAIDSYRKNKRHETFLEEYERESIEAVDENVEEWEKRVMSEVQIDALL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFERARKRVQNMIGGIQHDEFKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQRNI
HHHCC
>Mature Secondary Structure
MKVTNNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLATQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELKRYILRVAKNKAIDSYRKNKRHETFLEEYERESIEAVDENVEEWEKRVMSEVQIDALL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFERARKRVQNMIGGIQHDEFKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQRNI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA