Click here to switch to the map view.

The map label for this gene is 218901828

Identifier: 218901828

GI number: 218901828

Start: 664783

End: 665403

Strand: Reverse

Name: 218901828

Synonym: BCAH820_0689

Alternate gene names: NA

Gene position: 665403-664783 (Counterclockwise)

Preceding gene: 218901829

Following gene: 218901827

Centisome position: 12.55

GC content: 33.66

Gene sequence:

>621_bases
ATGTTCAAAAAAAGAGTTAAACTACTTTTTATATTATGTACTAGTGCATTCCTTTCTGGCTGCTGGGATCAAGAACCATT
AAGGGAAGCAAGGTTAGCTTATAGTATTGGATCTGATATTACGGAAGAGAATAAACTCCAGCAAACAATTGAGCTCGTAA
AAAGTTCAAGCGGAGAACAAGCTTCATTCGAGAATGAAATACATTCTGCAACCGGGCATAACATAAGAGATACGAGCGAT
GCACTGAAAAAAAATGTAACGGGAAATATTCGTTATTTCAAATATGGTGTTCAATTACTAGGAACCAAAATTCTAAAAAA
AGGTGTACTACCTTATTTAGATGTCAGCTTTCGGGACCCAACAAACCCAACTGCTTTAGTAAAACTTATTGCAGTAGATG
GTGAAACATCCGAGATACTAGAAAAAAAGAAAGTAGGAAATTTACTAATTGGAGATTTTCTAAAGAAAAAAGTGAAAAGT
TTAGAAGATATGAGTGTATTTCCAAAAGAAACTTTAGAGACAGCTGCTACAAAAATATTAGATCCCGGTAAGGACTTTAC
CCTTCCTTCTATAAAAATAAAAGGAAAGGAAGTAATTACAAACGGGATTAGCTTTATTTAA

Upstream 100 bases:

>100_bases
ATTGCAACTTTCACTGATAAGTTCACCTATATTTTCATCGTTGTCCTCCCTCTTTTATTTCTACTTTATTCAGTAATAAG
AAATAAGAAAGGAGAACAGT

Downstream 100 bases:

>100_bases
CAATGATAAATTAACTGGACATTTACCTTTGAAACAATCTGTTTTATTCGTGTTATTAACCGGAAAAATGGGAACAAGTG
CCCGTATAACTCAAAAACTT

Product: spore germination protein GerKC

Products: NA

Alternate protein names: Spore Germination Protein GerKC; Germination Protein Ger(X)C Family; GerKC1 Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQASFENEIHSATGHNIRDTSD
ALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDPTNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKS
LEDMSVFPKETLETAATKILDPGKDFTLPSIKIKGKEVITNGISFI

Sequences:

>Translated_206_residues
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQASFENEIHSATGHNIRDTSD
ALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDPTNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKS
LEDMSVFPKETLETAATKILDPGKDFTLPSIKIKGKEVITNGISFI
>Mature_206_residues
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQASFENEIHSATGHNIRDTSD
ALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDPTNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKS
LEDMSVFPKETLETAATKILDPGKDFTLPSIKIKGKEVITNGISFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22898; Mature: 22898

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQ
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
ASFENEIHSATGHNIRDTSDALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDP
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
TNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKSLEDMSVFPKETLETAATKIL
CCHHHEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
DPGKDFTLPSIKIKGKEVITNGISFI
CCCCCCCCCCEEECCHHHHHCCCCCC
>Mature Secondary Structure
MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQ
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
ASFENEIHSATGHNIRDTSDALKKNVTGNIRYFKYGVQLLGTKILKKGVLPYLDVSFRDP
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
TNPTALVKLIAVDGETSEILEKKKVGNLLIGDFLKKKVKSLEDMSVFPKETLETAATKIL
CCHHHEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
DPGKDFTLPSIKIKGKEVITNGISFI
CCCCCCCCCCEEECCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA