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The map label for this gene is yhdP [H]

Identifier: 218901803

GI number: 218901803

Start: 635559

End: 636857

Strand: Direct

Name: yhdP [H]

Synonym: BCAH820_0664

Alternate gene names: 218901803

Gene position: 635559-636857 (Clockwise)

Preceding gene: 218901802

Following gene: 218901804

Centisome position: 11.99

GC content: 34.57

Gene sequence:

>1299_bases
GTGGATATTTTAAAATTACTGATGGTAGCCATCCTTATTGGATTAACAGCATTTTTTGTAGCTGTTGAGTTTGCAATTAT
TAAGGTGCGTAGCAGTCGTATTGATCAACTCGTTAGTGAAAAACGACGAGGGGCATTGGCAGCGAAAAAAGTAACTTCGA
ACTTAGATGAATATTTATCAGCATGTCAGTTAGGTATTACAATTACCGCTTTAGGGCTTGGGTGGTTAGGCGAGCCGACT
ATAAAACATTTACTTGAGCCGTTGTTTTTAAAACTAAACTTATCTCCTGCAATTGCAAGTACCGTTTCATTTATTATTGC
TTTTGCAGTTATTACGTTTTTACATGTTGTTATTGGTGAACTTGCTCCCAAAACGTTCGCCATACAAAGAGCAGAGCAAG
TTAGCTTATTATTATCGAAGCCACTTATTTACTTTTACCGAATAATGTATCCGTTTATTTGGACTTTAAATGGTTCGGCA
AGGCTTGTAACAGGGTTATTTGGTTTACATCCAGCTTCAGAACATGAAGTAGCTCATTCAGAAGAAGAATTACGATTGAT
CTTATCTGAGAGTTATGAGAGCGGAGAGATTAATCAAAGGGAATTTAAATATGTAAATAACATTTTTGAATTTGATAATA
GAGTAGCAAAGGAAATTATGGTGCCTCGTACGGAAGTTATAGGTTTATATGAGGACGAACCATTTGAAACACATATTAAA
ATAATCGCACAAGAAAAATATACGAGGTATCCTGTATTTGGTGAAGATAAAGATGAAATCATTGGGATGGTTAATGTAAA
GGATTTATTTATTCGTTATATGGATGGTAATCGGGACGAGGAATGCTCCATTACGCCATATACAAGACCAGTTATTGAAG
TGTTAGAAAATATTCCTATACATGATTTACTATTACAAATGCAAAGAAAACATATTCCATTAGCTGTGTTGTATGATGAA
TACGGAGGTACAGCAGGAATTGTTACATTAGAAGATATTTTAGAAGAAATTGTTGGAGAAATCCGAGATGAATACGATGA
AGATGAACACCCGCCTATAGAGCATATAAGTGAAGGGTGTAAAATTGTAGAAGGAAAAGTGCTTATTAGTGAAGTGAATG
ATTTATTTGGCATTAACTTAATCGCTGATGATGTAGATACAATTGGTGGCTGGATTATGGTACAAAAGCAAATCGTTGCT
GAAGGAGATATTATTGAGAAACACGGCTTTTCTTTTAAAGTTCTGGAAAAAGATATGCATCAAATTAAACGAGTGGAAAT
AAAGAAGGTAGAAGAATGA

Upstream 100 bases:

>100_bases
GAATTTTATATAGGGTTGCTTTTGAGTAAATGAAGAAACTAAAGTGAAACTTCTTTTTAAAAGGAGGTGTAACTTTAGCT
AAGAAAGCTAAAGGGTATAT

Downstream 100 bases:

>100_bases
TTTTCTATAAAAGTTATATATAGAAAATTAAATGTTTGCGCTTTCAAAAAAGGTGCTATATAGTGAAGGTGGACACTGAA
AAATTCTTCTACATGATACT

Product: CBS domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGELAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWTLNGSA
RLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGCKIVEGKVLISEVNDLFGINLIADDVDTIGGWIMVQKQIVA
EGDIIEKHGFSFKVLEKDMHQIKRVEIKKVEE

Sequences:

>Translated_432_residues
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGELAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWTLNGSA
RLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGCKIVEGKVLISEVNDLFGINLIADDVDTIGGWIMVQKQIVA
EGDIIEKHGFSFKVLEKDMHQIKRVEIKKVEE
>Mature_432_residues
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGELAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWTLNGSA
RLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGCKIVEGKVLISEVNDLFGINLIADDVDTIGGWIMVQKQIVA
EGDIIEKHGFSFKVLEKDMHQIKRVEIKKVEE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=394, Percent_Identity=48.4771573604061, Blast_Score=381, Evalue=1e-106,
Organism=Escherichia coli, GI1790664, Length=433, Percent_Identity=23.094688221709, Blast_Score=142, Evalue=6e-35,
Organism=Escherichia coli, GI145693175, Length=418, Percent_Identity=24.8803827751196, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1786879, Length=257, Percent_Identity=30.7392996108949, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87082033, Length=234, Percent_Identity=23.9316239316239, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788119, Length=238, Percent_Identity=25.2100840336134, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17539402, Length=243, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 49059; Mature: 49059

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ACQLGITITALGLGWLGEPTIKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGE
HHHHCCEEEEECCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWTLNGSARLVTGLFGLHPASEHEVAHS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCHHHCC
EEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHH
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPI
EEECCCCCCCCCCCCCHHHEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCH
HDLLLQMQRKHIPLAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGC
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
KIVEGKVLISEVNDLFGINLIADDVDTIGGWIMVQKQIVAEGDIIEKHGFSFKVLEKDMH
EEEECHHHHHHHHHHHCCCHHHHHHHHHCCHHEEHHHHHHCCCEEHHCCCCHHHHHHHHH
QIKRVEIKKVEE
HHHHHHHHHCCC
>Mature Secondary Structure
MDILKLLMVAILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ACQLGITITALGLGWLGEPTIKHLLEPLFLKLNLSPAIASTVSFIIAFAVITFLHVVIGE
HHHHCCEEEEECCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAPKTFAIQRAEQVSLLLSKPLIYFYRIMYPFIWTLNGSARLVTGLFGLHPASEHEVAHS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCHHHCC
EEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVIGLYEDEPFETHIK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHH
IIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSITPYTRPVIEVLENIPI
EEECCCCCCCCCCCCCHHHEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCH
HDLLLQMQRKHIPLAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDEHPPIEHISEGC
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
KIVEGKVLISEVNDLFGINLIADDVDTIGGWIMVQKQIVAEGDIIEKHGFSFKVLEKDMH
EEEECHHHHHHHHHHHCCCHHHHHHHHHCCHHEEHHHHHHCCCEEHHCCCCHHHHHHHHH
QIKRVEIKKVEE
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]