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The map label for this gene is lytR [H]

Identifier: 218901800

GI number: 218901800

Start: 632518

End: 633534

Strand: Reverse

Name: lytR [H]

Synonym: BCAH820_0661

Alternate gene names: 218901800

Gene position: 633534-632518 (Counterclockwise)

Preceding gene: 218901801

Following gene: 218901799

Centisome position: 11.95

GC content: 34.32

Gene sequence:

>1017_bases
ATGATGAAATCCGATATGAACAAAGATACTCGAGCCAAAAAAGGACGCTCAAAGAAAAAACGTCTACTTTGGTTCCTTCT
TATTCCATTACTGATTATAGCACTTGGAGCAGGGGGATACTCCTTCCATATATACAGTAAAGCAAAATCAATTTTAAGTA
ATGCCTATTCTGAGCTGGGTCGCGGAGATAAATCCAGCAAACGTGAAAAAGCCGTTAAACCTATGACTGACAACATTTCC
ATACTTATTATGGGTGTTGATGAAAGTGATATTAGGGACAAGAATTATGGGAAAGCAACTCGTACAGATGCACTATTACT
TGCCACAATTAATAAAAACGATAAATCTGTTAAACTTGTTAGTATTCCACGTGACTCACGTGTCTACATTAAATCACGTG
AGAAATACGATAAAATTACACATGCGCACGTATTCGGTGGTGTGGACAGCACGATTGATACCGTAGAGAACTTTTTAGAT
GTTCCAGTTGACTACTATGTAAAATTCAACTTTAAATCATTTATCAAAATTGTTGATTCCCTTGGTGGTATTACTGTCGA
TGTTCCAGTTGAATTCACAGAACAAAATAGTAAAGATGAGGCTGATGCAATTCACCTTAAAAAAGGACGTCAACATTTAA
ATGGAGAAGAAGCACTGGCACTAGCTAGAACTCGTCATATCGATAGTGATTATATGCGAGGTCAACGTCAACAACTTGTT
TTAGAAGCTATTGCTGAAAAGGCATTATCTCTTAATTCCATTAATAAAATCGGTGGTCTATTAGACGCTGTTGATAAAGA
CTTAAAAACAAATTTAACTTTTGATGATATGATGACAATTGCAAAAAATTCAATGGGTTCAAACTTAAAAATGGACAAAT
TGCAAGTAGAAGGTACTGATAAATATATAGGTGGTATTTATTATTACGTTCCAAATGAAAAAAGCGTCAATAATATATCG
ACAACACTACAAGAACATCTCGGTGTTACGAATAAAAATGAACATAAAAAATTATAA

Upstream 100 bases:

>100_bases
TTTATACATGTACAATCGCTTTTATTTAGCGTACAATATTTTTTATGTATTTAAATGCGCTTCTAGATGTATACACTTTG
ATAGTTTTAAAGGAGAAAAA

Downstream 100 bases:

>100_bases
TAAAAAGGCTGCTAGAACTTTCTAGACAGCCTTTTTATTATAATTTTCAACATATTTTTCATGCATATTGTGACAAAAAG
AGACAATTATTACAACAGTG

Product: transcription antiterminator, LytR family

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MMKSDMNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKPMTDNIS
ILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLD
VPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEKSVNNIS
TTLQEHLGVTNKNEHKKL

Sequences:

>Translated_338_residues
MMKSDMNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKPMTDNIS
ILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLD
VPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEKSVNNIS
TTLQEHLGVTNKNEHKKL
>Mature_338_residues
MMKSDMNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKPMTDNIS
ILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLD
VPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEKSVNNIS
TTLQEHLGVTNKNEHKKL

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 37970; Mature: 37970

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSDMNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELG
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHC
RGDKSSKREKAVKPMTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLV
CCCCCHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEE
SIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDS
ECCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHH
LGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHH
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCC
KYIGGIYYYVPNEKSVNNISTTLQEHLGVTNKNEHKKL
CEECEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MMKSDMNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELG
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHC
RGDKSSKREKAVKPMTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLV
CCCCCHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEE
SIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDS
ECCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHH
LGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHH
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCC
KYIGGIYYYVPNEKSVNNISTTLQEHLGVTNKNEHKKL
CEECEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA