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The map label for this gene is kfoC [H]

Identifier: 218901472

GI number: 218901472

Start: 285441

End: 287372

Strand: Reverse

Name: kfoC [H]

Synonym: BCAH820_0310

Alternate gene names: 218901472

Gene position: 287372-285441 (Counterclockwise)

Preceding gene: 218901473

Following gene: 218901471

Centisome position: 5.42

GC content: 33.23

Gene sequence:

>1932_bases
ATGCATGTTAATAAGAAAATCATTTATGTATCCCATGATGCCCATTTCCACGGAGCACAGCTGCTTTCTTTACATACTAT
TAAAGCTCTCAAAGAAAACTTTCATTACTCCGTCGCAATTATTTCTATTGGAACGGGCATTTTAATCCACGACTTTCAAA
AGTATGGTCCTGTTTATTGCCTAGAGGAAGACTACCCAACGGAAAACAAAGTCGAATCATTAATAAAGAAGTTATTATCA
CAAGACTATACCATCGCCATATGTAGTACCGTCATAAGTGGTGATATAGTTGCATTACTAGCTAAACATAATATAAAAGT
TATTTCATTAATACATGAATTGCCGCATTTAATACAACAGTACTCAGCTGAGGGAAAAGCGAGAAAAATTGCCGAATCTG
CTCACAAAATTGTCTTCCCTTCACAATACGTGTATGAAAAGTTCCATACAATCACCCAATTAGATCATCAAAAGTGCCAC
ATCCTCCCTCAAGGTTTGTTTAATCACAATCCTTATAAGAACAATATTGCAAAAGCGAGAAACGAATTACGAAAAAAACA
CAACCTGCCTCTAGATAGCAAAATCATTTTGGGGGTAGGCTTCGCTGATCATCGAAAAGGGATAGATTTATTCTCACTTA
TTGCTTACTCAGTAAGAAAGATTCATAAAAATATTCATTTTATCTGGGTTGGGAAAACAGATGTTCACTTTTTAAACACG
CTATCCCAAAGATATACAGCACATTTTACATTAGTAGATCCTACTCCAGATATCGGTTTATATAACGCTGGGGCTGATTT
ATATTTATTAACTTCAAGAGAAGATCCTTTCCCAAACGTGGTTTTAGAAGCATTAGATACAAAAGTCCCTGTTATAGGGT
TTAAAAACGCTGGCGGTTTTGAAGATGTTGTTACGGAACAAACTGGCGCATTAGTAGACTATTTAAACTTACCAATGATG
CTGGAAAAAATATACGAATTTATCGGGGATGAAGATTTACGCTTACAAAAAGGGACCTTTGGCCAAGAACTTATTGAAAA
AAATTTCAACTTTCTTCATTACATTTATCAATTATTAAACTTGCTTGAGCATAATTATAAAAAAATAAGCGTCATTGTAC
CGAACTATAATTACGAAAAATACTTATCCGAACGAGTTACATCAATATTAAATCAAACCTATCCCCTTTACGAACTAATT
TTCCTAGACGATGCCTCCACTGACAATAGCGTATCTATATTTGAAAAGCTGCTCTCAAACGAAAATAAACATCACCTGAA
AATTCAGCAGATTATTAATGATAAAAACTCTGGTTCTGTATTTAAACAATGGATAAAAGGTGTCTCTGCAGCAACCGGTG
ATTATATTTGGATTGCTGAGGCCGATGACTTATGCGATCAGACATTTTTAGAAGAAGTAATACAAGGTTTTCATATAGAT
AGTGATGTTGCCTTAAGTTACACACAATCAAAACAAATAGATGAACAAGGAAATATATTGGCTAATCATTATTTAGATTA
CACAAATGATATTGATAAAGAAAAATGGCAGAGTTCTTATGTGCGAAAAGGGATAGATGAAATACAAGATACGTTACTTA
TCAAAAACACCATACCTAATGTCTCAAGTGTAGTTTTTAAAAACATAGGTATAAAAACAACAGCAAAACAATTGGAAAAG
TTTAAAATAGCCGGTGATTGGTTTTTCTATGTTTCTATCCTTAAAGAGGGGAACATTTATTTCAATCCAAAACCTCTAAA
CTATCATAGACGACATAAAAATAGTGTAACGAGAGCAGAAGATTCATATTCCCATTACAGTGAAGTTGTACAAATGCAGA
ATTTTATTAAAGAAACCTTTACTATCGACGACATTTCAAAAAAGAAAATGTACGCATATAGAAAGTATCTTAAAGCATAT
TTGAAGGTTTAA

Upstream 100 bases:

>100_bases
ATATATTAAAAGTAGCTTTTTTATTTAGACTTCTCTCTAGAAATTATAAATACACCATACATTTACTAAAAATCTAATTA
ACCTTAGGAGGCGTTATGAA

Downstream 100 bases:

>100_bases
TTATATATTTTCTTTACCATCCGTATCTCTTATAAGATATTACTATTATTTAAGGGAGGATTACTCTTTGAAAGAATTTA
TAGAGACAAATAAAGATTTG

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: CS; Chondroitin polymerase; Glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase; UDP-GalNAc transferase; N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase; UDP-GlcUA transferase [H]

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MHVNKKIIYVSHDAHFHGAQLLSLHTIKALKENFHYSVAIISIGTGILIHDFQKYGPVYCLEEDYPTENKVESLIKKLLS
QDYTIAICSTVISGDIVALLAKHNIKVISLIHELPHLIQQYSAEGKARKIAESAHKIVFPSQYVYEKFHTITQLDHQKCH
ILPQGLFNHNPYKNNIAKARNELRKKHNLPLDSKIILGVGFADHRKGIDLFSLIAYSVRKIHKNIHFIWVGKTDVHFLNT
LSQRYTAHFTLVDPTPDIGLYNAGADLYLLTSREDPFPNVVLEALDTKVPVIGFKNAGGFEDVVTEQTGALVDYLNLPMM
LEKIYEFIGDEDLRLQKGTFGQELIEKNFNFLHYIYQLLNLLEHNYKKISVIVPNYNYEKYLSERVTSILNQTYPLYELI
FLDDASTDNSVSIFEKLLSNENKHHLKIQQIINDKNSGSVFKQWIKGVSAATGDYIWIAEADDLCDQTFLEEVIQGFHID
SDVALSYTQSKQIDEQGNILANHYLDYTNDIDKEKWQSSYVRKGIDEIQDTLLIKNTIPNVSSVVFKNIGIKTTAKQLEK
FKIAGDWFFYVSILKEGNIYFNPKPLNYHRRHKNSVTRAEDSYSHYSEVVQMQNFIKETFTIDDISKKKMYAYRKYLKAY
LKV

Sequences:

>Translated_643_residues
MHVNKKIIYVSHDAHFHGAQLLSLHTIKALKENFHYSVAIISIGTGILIHDFQKYGPVYCLEEDYPTENKVESLIKKLLS
QDYTIAICSTVISGDIVALLAKHNIKVISLIHELPHLIQQYSAEGKARKIAESAHKIVFPSQYVYEKFHTITQLDHQKCH
ILPQGLFNHNPYKNNIAKARNELRKKHNLPLDSKIILGVGFADHRKGIDLFSLIAYSVRKIHKNIHFIWVGKTDVHFLNT
LSQRYTAHFTLVDPTPDIGLYNAGADLYLLTSREDPFPNVVLEALDTKVPVIGFKNAGGFEDVVTEQTGALVDYLNLPMM
LEKIYEFIGDEDLRLQKGTFGQELIEKNFNFLHYIYQLLNLLEHNYKKISVIVPNYNYEKYLSERVTSILNQTYPLYELI
FLDDASTDNSVSIFEKLLSNENKHHLKIQQIINDKNSGSVFKQWIKGVSAATGDYIWIAEADDLCDQTFLEEVIQGFHID
SDVALSYTQSKQIDEQGNILANHYLDYTNDIDKEKWQSSYVRKGIDEIQDTLLIKNTIPNVSSVVFKNIGIKTTAKQLEK
FKIAGDWFFYVSILKEGNIYFNPKPLNYHRRHKNSVTRAEDSYSHYSEVVQMQNFIKETFTIDDISKKKMYAYRKYLKAY
LKV
>Mature_643_residues
MHVNKKIIYVSHDAHFHGAQLLSLHTIKALKENFHYSVAIISIGTGILIHDFQKYGPVYCLEEDYPTENKVESLIKKLLS
QDYTIAICSTVISGDIVALLAKHNIKVISLIHELPHLIQQYSAEGKARKIAESAHKIVFPSQYVYEKFHTITQLDHQKCH
ILPQGLFNHNPYKNNIAKARNELRKKHNLPLDSKIILGVGFADHRKGIDLFSLIAYSVRKIHKNIHFIWVGKTDVHFLNT
LSQRYTAHFTLVDPTPDIGLYNAGADLYLLTSREDPFPNVVLEALDTKVPVIGFKNAGGFEDVVTEQTGALVDYLNLPMM
LEKIYEFIGDEDLRLQKGTFGQELIEKNFNFLHYIYQLLNLLEHNYKKISVIVPNYNYEKYLSERVTSILNQTYPLYELI
FLDDASTDNSVSIFEKLLSNENKHHLKIQQIINDKNSGSVFKQWIKGVSAATGDYIWIAEADDLCDQTFLEEVIQGFHID
SDVALSYTQSKQIDEQGNILANHYLDYTNDIDKEKWQSSYVRKGIDEIQDTLLIKNTIPNVSSVVFKNIGIKTTAKQLEK
FKIAGDWFFYVSILKEGNIYFNPKPLNYHRRHKNSVTRAEDSYSHYSEVVQMQNFIKETFTIDDISKKKMYAYRKYLKAY
LKV

Specific function: Catalyzes the polymerization of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units. Each unit has the composition in beta-(1->4)-GlcUA-beta-(1->3)- GalNAc [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. CS/HAS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.4.1.175; =2.4.1.226 [H]

Molecular weight: Translated: 74147; Mature: 74147

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVNKKIIYVSHDAHFHGAQLLSLHTIKALKENFHYSVAIISIGTGILIHDFQKYGPVYC
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHCCCEEE
LEEDYPTENKVESLIKKLLSQDYTIAICSTVISGDIVALLAKHNIKVISLIHELPHLIQQ
ECCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH
YSAEGKARKIAESAHKIVFPSQYVYEKFHTITQLDHQKCHILPQGLFNHNPYKNNIAKAR
HCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCCHHEECCCHHCCCCCCHHHHHHHH
NELRKKHNLPLDSKIILGVGFADHRKGIDLFSLIAYSVRKIHKNIHFIWVGKTDVHFLNT
HHHHHHHCCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHH
LSQRYTAHFTLVDPTPDIGLYNAGADLYLLTSREDPFPNVVLEALDTKVPVIGFKNAGGF
HHHHHEEEEEEECCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCH
EDVVTEQTGALVDYLNLPMMLEKIYEFIGDEDLRLQKGTFGQELIEKNFNFLHYIYQLLN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCHHHHHHHHHHH
LLEHNYKKISVIVPNYNYEKYLSERVTSILNQTYPLYELIFLDDASTDNSVSIFEKLLSN
HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCC
ENKHHLKIQQIINDKNSGSVFKQWIKGVSAATGDYIWIAEADDLCDQTFLEEVIQGFHID
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC
SDVALSYTQSKQIDEQGNILANHYLDYTNDIDKEKWQSSYVRKGIDEIQDTLLIKNTIPN
CCCEEEEHHHHCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHCCCC
VSSVVFKNIGIKTTAKQLEKFKIAGDWFFYVSILKEGNIYFNPKPLNYHRRHKNSVTRAE
HHHHHHHHCCCHHHHHHHHHHEECCHHEEEEEHHHCCCEEECCCCCCHHHHHCCCCCCCH
DSYSHYSEVVQMQNFIKETFTIDDISKKKMYAYRKYLKAYLKV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHVNKKIIYVSHDAHFHGAQLLSLHTIKALKENFHYSVAIISIGTGILIHDFQKYGPVYC
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHCCCEEE
LEEDYPTENKVESLIKKLLSQDYTIAICSTVISGDIVALLAKHNIKVISLIHELPHLIQQ
ECCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH
YSAEGKARKIAESAHKIVFPSQYVYEKFHTITQLDHQKCHILPQGLFNHNPYKNNIAKAR
HCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCCHHEECCCHHCCCCCCHHHHHHHH
NELRKKHNLPLDSKIILGVGFADHRKGIDLFSLIAYSVRKIHKNIHFIWVGKTDVHFLNT
HHHHHHHCCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHH
LSQRYTAHFTLVDPTPDIGLYNAGADLYLLTSREDPFPNVVLEALDTKVPVIGFKNAGGF
HHHHHEEEEEEECCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCH
EDVVTEQTGALVDYLNLPMMLEKIYEFIGDEDLRLQKGTFGQELIEKNFNFLHYIYQLLN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCHHHHHHHHHHH
LLEHNYKKISVIVPNYNYEKYLSERVTSILNQTYPLYELIFLDDASTDNSVSIFEKLLSN
HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCC
ENKHHLKIQQIINDKNSGSVFKQWIKGVSAATGDYIWIAEADDLCDQTFLEEVIQGFHID
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC
SDVALSYTQSKQIDEQGNILANHYLDYTNDIDKEKWQSSYVRKGIDEIQDTLLIKNTIPN
CCCEEEEHHHHCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHCCCC
VSSVVFKNIGIKTTAKQLEKFKIAGDWFFYVSILKEGNIYFNPKPLNYHRRHKNSVTRAE
HHHHHHHHCCCHHHHHHHHHHEECCHHEEEEEHHHCCCEEECCCCCCHHHHHCCCCCCCH
DSYSHYSEVVQMQNFIKETFTIDDISKKKMYAYRKYLKAYLKV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11943778 [H]