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The map label for this gene is yqkD [H]

Identifier: 218901464

GI number: 218901464

Start: 272402

End: 273361

Strand: Direct

Name: yqkD [H]

Synonym: BCAH820_0300

Alternate gene names: 218901464

Gene position: 272402-273361 (Clockwise)

Preceding gene: 218901463

Following gene: 218901465

Centisome position: 5.14

GC content: 35.21

Gene sequence:

>960_bases
ATGAAAAAGATAGGTATGATTACTATAGTAGTCTTAGTCCTTCTAGCGATTGTGTATATGTTAGTCGGGAATTATTTTTA
TAATTATGCGTTGAATGCGAAACAAGAGAAAGAATTTTTGCAAGGTAATCCTCATTTAGCAGAAACGGTAAATGCATCGG
GAGATGTATTGGCTATAAATGAAGAAAAGAATGCGAACTTCGTATCGAAGTATAAGCCTAACACATTAACTATACGTTCT
TTCGATAAATTGAATTTAAAAGGTTATGAATATATGAATGAACAATCTAGTCATAAATGGGCAATTGTAGTTCATGGATA
CAATGGTAGAGCATCAGAAATGACGAAATATATTCGTAACTTTTATGAACAAGGTTATAATGTCATAGCACCAGATCTTC
GTGGGCACGGAAATAGTGAAGGAAATTATGTTGGTATGGGCTGGCATGATCGTAAAGATATTTTGGTTTGGATTCAACAA
GTTGTAAAGAAAGACCCTAATGCTGAAATAGCACTATTTGGTGTTTCGATGGGCGCGGCAACTGTAATGATGACTTCAGG
TGAAGAGTTACCTTCTAACGTTAAAGTTATTATTGAAGATTGTGGATACTCAACTGTTATTGATGAATTTACGTATCAAC
TAAAAGATTTATTCCACTTGCCGAAATTTCCCGTTATGAATGCGGCAAATACAGTTACAAAATTAAGAGCTGGATATGAT
TTGGAAGAAGCTTCAGCCGTAAAACAAGTGGCGAAAAGTAAAACACCGATACTATTCATTCACGGGGATGCGGATACATT
CGTTCCTTTTGAAATGTTAGATGAAGTATATAATGCTGCAAAAGTAGAAAAAGAGAAATTAATTGTTCCAGGTGCTGGAC
ATGGAGAAGCTGAGAAGATAGATTCAAACACATATTGGAATACCGTATGGAAGTTCGTGGGGAGATATATTCCAGCATAA

Upstream 100 bases:

>100_bases
TTATTTTTTTGTGGAAGTAATTTATTGATGTGTTAAAATAGTACAGTTATTTTTTAAAACAATTTAATATAGGGATATTA
ATTTTTAAAAAGGAGATAAT

Downstream 100 bases:

>100_bases
TTAGATTTATATATACGATAATCAGAAGGTGATACTTTTGATTATCGTGTTTCTATTTATAAATTCATTTTAGGTTTTAG
TATATAAGGCTTGAAGCATA

Product: alpha/beta hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKKIGMITIVVLVLLAIVYMLVGNYFYNYALNAKQEKEFLQGNPHLAETVNASGDVLAINEEKNANFVSKYKPNTLTIRS
FDKLNLKGYEYMNEQSSHKWAIVVHGYNGRASEMTKYIRNFYEQGYNVIAPDLRGHGNSEGNYVGMGWHDRKDILVWIQQ
VVKKDPNAEIALFGVSMGAATVMMTSGEELPSNVKVIIEDCGYSTVIDEFTYQLKDLFHLPKFPVMNAANTVTKLRAGYD
LEEASAVKQVAKSKTPILFIHGDADTFVPFEMLDEVYNAAKVEKEKLIVPGAGHGEAEKIDSNTYWNTVWKFVGRYIPA

Sequences:

>Translated_319_residues
MKKIGMITIVVLVLLAIVYMLVGNYFYNYALNAKQEKEFLQGNPHLAETVNASGDVLAINEEKNANFVSKYKPNTLTIRS
FDKLNLKGYEYMNEQSSHKWAIVVHGYNGRASEMTKYIRNFYEQGYNVIAPDLRGHGNSEGNYVGMGWHDRKDILVWIQQ
VVKKDPNAEIALFGVSMGAATVMMTSGEELPSNVKVIIEDCGYSTVIDEFTYQLKDLFHLPKFPVMNAANTVTKLRAGYD
LEEASAVKQVAKSKTPILFIHGDADTFVPFEMLDEVYNAAKVEKEKLIVPGAGHGEAEKIDSNTYWNTVWKFVGRYIPA
>Mature_319_residues
MKKIGMITIVVLVLLAIVYMLVGNYFYNYALNAKQEKEFLQGNPHLAETVNASGDVLAINEEKNANFVSKYKPNTLTIRS
FDKLNLKGYEYMNEQSSHKWAIVVHGYNGRASEMTKYIRNFYEQGYNVIAPDLRGHGNSEGNYVGMGWHDRKDILVWIQQ
VVKKDPNAEIALFGVSMGAATVMMTSGEELPSNVKVIIEDCGYSTVIDEFTYQLKDLFHLPKFPVMNAANTVTKLRAGYD
LEEASAVKQVAKSKTPILFIHGDADTFVPFEMLDEVYNAAKVEKEKLIVPGAGHGEAEKIDSNTYWNTVWKFVGRYIPA

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 35904; Mature: 35904

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGMITIVVLVLLAIVYMLVGNYFYNYALNAKQEKEFLQGNPHLAETVNASGDVLAIN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCCCCCCEEEEE
EEKNANFVSKYKPNTLTIRSFDKLNLKGYEYMNEQSSHKWAIVVHGYNGRASEMTKYIRN
CCCCCCHHHCCCCCEEEEECCCCCCCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHH
FYEQGYNVIAPDLRGHGNSEGNYVGMGWHDRKDILVWIQQVVKKDPNAEIALFGVSMGAA
HHHCCCEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCE
TVMMTSGEELPSNVKVIIEDCGYSTVIDEFTYQLKDLFHLPKFPVMNAANTVTKLRAGYD
EEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
LEEASAVKQVAKSKTPILFIHGDADTFVPFEMLDEVYNAAKVEKEKLIVPGAGHGEAEKI
HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCHHHC
DSNTYWNTVWKFVGRYIPA
CCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIGMITIVVLVLLAIVYMLVGNYFYNYALNAKQEKEFLQGNPHLAETVNASGDVLAIN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCCCCCCEEEEE
EEKNANFVSKYKPNTLTIRSFDKLNLKGYEYMNEQSSHKWAIVVHGYNGRASEMTKYIRN
CCCCCCHHHCCCCCEEEEECCCCCCCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHH
FYEQGYNVIAPDLRGHGNSEGNYVGMGWHDRKDILVWIQQVVKKDPNAEIALFGVSMGAA
HHHCCCEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCE
TVMMTSGEELPSNVKVIIEDCGYSTVIDEFTYQLKDLFHLPKFPVMNAANTVTKLRAGYD
EEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
LEEASAVKQVAKSKTPILFIHGDADTFVPFEMLDEVYNAAKVEKEKLIVPGAGHGEAEKI
HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCHHHC
DSNTYWNTVWKFVGRYIPA
CCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]