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The map label for this gene is ydiF [H]

Identifier: 218901419

GI number: 218901419

Start: 216491

End: 218371

Strand: Direct

Name: ydiF [H]

Synonym: BCAH820_0238

Alternate gene names: 218901419

Gene position: 216491-218371 (Clockwise)

Preceding gene: 218901417

Following gene: 218901421

Centisome position: 4.08

GC content: 36.36

Gene sequence:

>1881_bases
ATGACAATTTGTAGTGTAAATAATGTAACGAAATCTTTTGGTGGAAACATCATATTTGAAAATATATCGCTTGAAATAAA
GAATGGTGAACGTGTTGGATTAGTTGGTCGTAACGGTAGCGGGAAGACAACAATCTTTCAGCTTTTAACTGGAATGGAAA
GTTTGGATGCAGGGGCCATTCATATGAAGAAAGGTACACGTATTGGTCATGTGGCACAAATTCCGAAATTTGATGAGAGT
ATGACTGTATATGAAGTATTGAGTTCCGCTTTTAAAATAGAAAAGGAATTAGAAAGAGAAATGCGTACTTTAGAAAAAGA
TATGGCGGAAGAACAGGGATCTTCTGTTTTACAAAAATTAATGGAAAGATACGGAATCATCCAAGAAAAGTTTGCGTTTC
TTGGTGGTTATGAAATCGAAGCGAACATTATGAAGGTAGCAAATGGTTTACAGGTGACAGAACTATTCCCTCGGTCATTT
TTAGAGTTAAGTGGTGGGGAACAAACAAAAGTAAGCCTTGCATACATGTTGCTGCAGAAACCAGATTTACTTTTATTAGA
TGAACCAACTAATCATTTAGATTTATTTGCCGTAGAATGGTTAGAGCAATTTTTAAAAGAATATAACGGAACGGTTATGG
TTATTTCACATGACCGCTATTTCCTTGATGAAGTTGTAACGAAGATTTTTGATTTAGAAGATGGAGAGATTCACGTGTAT
CATACAAACTATTCTCAGTTTGTTGAAGAGAAGGAAGAAAGGTTGCTTCAGGAGTTTCAAGCTTATCAAGAACAGCAAAA
GAAAATAAAGAAAATGAAAGAAGCAATTAAGCGACTACGTGAATGGGCAAATCAGGCGAATCCTCCGAATGAAGGATTGC
ATAAGAGAGCAAGAAGTATGGAGCGTGCACTGGAACGTATGCAAAAACTAAAGAAACCTATTTTAGAACGAAAACAAATG
GGACTTCAGTTTGAAGGACAAGATAGAAGTGGAAAAGATGTTGTTGTAATAAAAGAAGTGAGTAAAGGGTTTGCTGACCA
CCCCTTATTTAACGAAGTGAATTTACATGTTCGTTTTCAAGAGCGTGTGGCCATCGTTGGTCGTAATGGTACAGGAAAGA
CAACGCTACTAAAATTATTATTAGAACAAATAGAACCAGACGCGGGAGAAATTCGAATTGGTAGTAGTGTGAAAATCGGT
TATTTATCCCAGCATGCGTACGGAAATAGGAAGAGTAATGTATTAGAGGCTTTTAGAGAATATGTAGCTGTAACAGAGGG
AGAAGCGAGACATATATTAGCTAAGTTTTTATTTTATGGTCCAGCGGTGTTTAAGAAGGTGACGCAACTGAGCGGTGGAG
AAAAAATGAGGTTAAGACTTGCGCAACTTATGTATCAAGATATCAATTTTTTAATTTTAGATGAGCCGACAAACCATCTC
GACATTGAATCAAGGGAAGTTTTAGAGGAAGCTCTTGAACAATATAATGGGACGATTTTAGCTGTTTCACATGATCGTTA
TTTTTTAAATAAGTTATTTGAAAAGACGTATTGGATTGATGAGCGTAAATTATTTGAGTTTGCAGGAAACTATGCATGGG
CGCGTCAAAAGTGGGAGGAAAGGCTCGAGACGCAAGTAATAAAGCAGCAACGCCAAGGAAGAAAAAGTATTGAAACAGCC
CCTGTAAAAAAGAAAGAAGCTAGGAATATTGAGGAGATTGAAACCGAGTTAATGCATGTAGAAGAAGATATATATACGCT
TGAGTGTACAATGGAGCATGTAGTTGATATTAAAATGCTTGAACAATTGTATGAAGAAAAAACGAAGAAAGAGTTGTTAC
GAGCGGAACTATATAATGAGTTAGAGAATATTGTGGAGTGA

Upstream 100 bases:

>100_bases
CACGTGTGAAAAGGGAGCTATTTAGCTTCCTTTTTCTATGTCGAAAACCATGGGGAATGTTTCTTTCCCATGGTTTTTTA
TATTGAAAGGAGTACGGAAA

Downstream 100 bases:

>100_bases
AAAATGAAAAGCGAATTCTTTCAGTTTTACTGAAGGATTCGCTTTTTTATACTGCTATTTTGCTTTAAGAGATAAATAAA
GTTGTGTTTCACGTGAAACA

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDES
MTVYEVLSSAFKIEKELEREMRTLEKDMAEEQGSSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSF
LELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
HTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQM
GLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQERVAIVGRNGTGKTTLLKLLLEQIEPDAGEIRIGSSVKIG
YLSQHAYGNRKSNVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDERKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETA
PVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKMLEQLYEEKTKKELLRAELYNELENIVE

Sequences:

>Translated_626_residues
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDES
MTVYEVLSSAFKIEKELEREMRTLEKDMAEEQGSSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSF
LELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
HTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQM
GLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQERVAIVGRNGTGKTTLLKLLLEQIEPDAGEIRIGSSVKIG
YLSQHAYGNRKSNVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDERKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETA
PVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKMLEQLYEEKTKKELLRAELYNELENIVE
>Mature_625_residues
TICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDESM
TVYEVLSSAFKIEKELEREMRTLEKDMAEEQGSSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSFL
ELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVYH
TNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQMG
LQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQERVAIVGRNGTGKTTLLKLLLEQIEPDAGEIRIGSSVKIGY
LSQHAYGNRKSNVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHLD
IESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDERKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETAP
VKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKMLEQLYEEKTKKELLRAELYNELENIVE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=522, Percent_Identity=32.183908045977, Blast_Score=253, Evalue=4e-67,
Organism=Homo sapiens, GI10947137, Length=556, Percent_Identity=30.3956834532374, Blast_Score=222, Evalue=1e-57,
Organism=Homo sapiens, GI27881506, Length=556, Percent_Identity=30.3956834532374, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI69354671, Length=528, Percent_Identity=31.4393939393939, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI10947135, Length=528, Percent_Identity=31.4393939393939, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI255708477, Length=193, Percent_Identity=31.6062176165803, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI156105685, Length=200, Percent_Identity=31, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI42741659, Length=186, Percent_Identity=30.1075268817204, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI9961252, Length=187, Percent_Identity=28.8770053475936, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI4505771, Length=187, Percent_Identity=28.8770053475936, Blast_Score=67, Evalue=7e-11,
Organism=Homo sapiens, GI90421313, Length=155, Percent_Identity=26.4516129032258, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI1789751, Length=614, Percent_Identity=32.2475570032573, Blast_Score=296, Evalue=3e-81,
Organism=Escherichia coli, GI1787041, Length=537, Percent_Identity=34.4506517690875, Blast_Score=287, Evalue=2e-78,
Organism=Escherichia coli, GI2367384, Length=526, Percent_Identity=33.2699619771863, Blast_Score=272, Evalue=5e-74,
Organism=Escherichia coli, GI1787182, Length=644, Percent_Identity=32.1428571428571, Blast_Score=268, Evalue=9e-73,
Organism=Escherichia coli, GI1788225, Length=269, Percent_Identity=25.6505576208178, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=26.1802575107296, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081791, Length=222, Percent_Identity=27.9279279279279, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1788165, Length=197, Percent_Identity=26.3959390862944, Blast_Score=76, Evalue=8e-15,
Organism=Escherichia coli, GI1786803, Length=233, Percent_Identity=24.8927038626609, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786345, Length=186, Percent_Identity=31.1827956989247, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI48994997, Length=246, Percent_Identity=24.390243902439, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1790739, Length=236, Percent_Identity=24.5762711864407, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786872, Length=273, Percent_Identity=26.007326007326, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=535, Percent_Identity=30.6542056074766, Blast_Score=235, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI17555318, Length=562, Percent_Identity=30.4270462633452, Blast_Score=232, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI17553372, Length=537, Percent_Identity=32.4022346368715, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI193211015, Length=189, Percent_Identity=29.6296296296296, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=189, Percent_Identity=29.6296296296296, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=189, Percent_Identity=29.6296296296296, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=536, Percent_Identity=32.8358208955224, Blast_Score=230, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6320874, Length=536, Percent_Identity=28.544776119403, Blast_Score=223, Evalue=5e-59,
Organism=Saccharomyces cerevisiae, GI6324314, Length=412, Percent_Identity=25.9708737864078, Blast_Score=136, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6325030, Length=396, Percent_Identity=27.020202020202, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6323278, Length=416, Percent_Identity=25.2403846153846, Blast_Score=133, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6323217, Length=200, Percent_Identity=29, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666836, Length=531, Percent_Identity=32.7683615819209, Blast_Score=258, Evalue=9e-69,
Organism=Drosophila melanogaster, GI24642252, Length=528, Percent_Identity=31.8181818181818, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI18859989, Length=528, Percent_Identity=31.8181818181818, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24641342, Length=549, Percent_Identity=32.2404371584699, Blast_Score=228, Evalue=1e-59,
Organism=Drosophila melanogaster, GI281363262, Length=189, Percent_Identity=29.1005291005291, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24653245, Length=189, Percent_Identity=29.1005291005291, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17136662, Length=187, Percent_Identity=28.8770053475936, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24659289, Length=182, Percent_Identity=28.021978021978, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI62484234, Length=156, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72658; Mature: 72527

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAI
CEEECCCHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCE
HMKKGTRIGHVAQIPKFDESMTVYEVLSSAFKIEKELEREMRTLEKDMAEEQGSSVLQKL
EECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSFLELSGGEQTKVSLAYMLLQK
HHHHCCHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE
HTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ERALERMQKLKKPILERKQMGLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQ
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEE
ERVAIVGRNGTGKTTLLKLLLEQIEPDAGEIRIGSSVKIGYLSQHAYGNRKSNVLEAFRE
EEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEHHHCCCCCHHHHHHHHHH
YVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDERKLFEFAGNYAWARQKWEE
CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
RLETQVIKQQRQGRKSIETAPVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKML
HHHHHHHHHHHHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHH
EQLYEEKTKKELLRAELYNELENIVE
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAI
EEECCCHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCE
HMKKGTRIGHVAQIPKFDESMTVYEVLSSAFKIEKELEREMRTLEKDMAEEQGSSVLQKL
EECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSFLELSGGEQTKVSLAYMLLQK
HHHHCCHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE
HTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ERALERMQKLKKPILERKQMGLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQ
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEE
ERVAIVGRNGTGKTTLLKLLLEQIEPDAGEIRIGSSVKIGYLSQHAYGNRKSNVLEAFRE
EEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEHHHCCCCCHHHHHHHHHH
YVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDERKLFEFAGNYAWARQKWEE
CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
RLETQVIKQQRQGRKSIETAPVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKML
HHHHHHHHHHHHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHH
EQLYEEKTKKELLRAELYNELENIVE
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]