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The map label for this gene is yrdR [H]

Identifier: 218901405

GI number: 218901405

Start: 205199

End: 206152

Strand: Direct

Name: yrdR [H]

Synonym: BCAH820_0224

Alternate gene names: 218901405

Gene position: 205199-206152 (Clockwise)

Preceding gene: 218901403

Following gene: 218901406

Centisome position: 3.87

GC content: 34.7

Gene sequence:

>954_bases
ATGATAATAGGAGCTTTAGCATGTTTGATTGCAAGTATGTCATGGGGAGCGATGTTTCCAGTTGCTGATCATGCGTTAGA
ATACATAGATCCGTTTTATTTTTCGCTTATTCGCTATGGAGCGGTGGCGATAATGCTGATTATATTGTTGTTAATGAAAG
AAGGGAAACAGGCATTTCGTTTAGAAGGAAGAGGAAAGTTACTCGTCTTTTTCGGAACGATGGCGTTTACTGTATATAAT
GTACTTATATTTTTAGGTCAAATGTTAATGGGAAAATCAGGCGTGATGGTAGCCTCCATTATGGAAGCACTTATGCCGAT
GATTTCTATTTGTATCCTATGGGGATATAAGCATGTAAAACCGAAAAAGTATATGATAACAAGCATGCTTATCGCTTTTA
TAGGGGCTGTATTTGTTATTACAAAAGGTGATATGAGTTTCTTTTTAACATTGAAAGATAACATGTTTTCGCTAGCATGT
ATATTTGTTGGAGTTGTGGGCTGGGTTATTTATACGATGGGTGGTCAAACGTGTAGCGATTGGTCAACATTACGTTATTC
TACGTTGACGTGTGTATTCGGTACGACTGTTACAGGAATTATAACGATAATTATAACGGCGTTTGGATATGTTTCAGTTC
CGAGTATGGGAACGATTTCTATTGTGAAATACGATTTGTTATTTATGATGACATTACCAGGAATAGTAGCGTTACTAGCT
TGGAACTATGGTGTGAAAATTTTATCGTCCATTAATGGGATTTTATTTATTAATTTTGTACCCATTACAACTTTAGTTAT
TATGATGATGCAAGGATATCAAATAACAATGTTTGATATTGTAGGGACTTTATTTGTTATTGCAGCACTTATTCGTAATA
ATGTTTGTCAGAGGAAAGAAGAAAATATCAACAAGAGAATTTTAGAAGAAGAGCAATTACGTCAAGCTGTTTAA

Upstream 100 bases:

>100_bases
TTAACATCATTTTGAATCATTTTACGTGATATATTTTTTCTTTTACAATTCTCTTTGTGCAAATAGAAAGAAGCGGGGGA
TTGTGGTGAGAAGAGGTCAA

Downstream 100 bases:

>100_bases
TAGGCAATTGGAGGATTTTACATGTTAGAAAGTTTATTGTTTTTCTTTGCCGTCGGAGTTGCTTGTGAGCTTGCAGCAAT
TAATCGAAATGGTCGTAAGA

Product: transporter, EamA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIILLLMKEGKQAFRLEGRGKLLVFFGTMAFTVYN
VLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHVKPKKYMITSMLIAFIGAVFVITKGDMSFFLTLKDNMFSLAC
IFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTISIVKYDLLFMMTLPGIVALLA
WNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLFVIAALIRNNVCQRKEENINKRILEEEQLRQAV

Sequences:

>Translated_317_residues
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIILLLMKEGKQAFRLEGRGKLLVFFGTMAFTVYN
VLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHVKPKKYMITSMLIAFIGAVFVITKGDMSFFLTLKDNMFSLAC
IFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTISIVKYDLLFMMTLPGIVALLA
WNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLFVIAALIRNNVCQRKEENINKRILEEEQLRQAV
>Mature_317_residues
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIILLLMKEGKQAFRLEGRGKLLVFFGTMAFTVYN
VLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHVKPKKYMITSMLIAFIGAVFVITKGDMSFFLTLKDNMFSLAC
IFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTISIVKYDLLFMMTLPGIVALLA
WNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLFVIAALIRNNVCQRKEENINKRILEEEQLRQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35300; Mature: 35300

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIILLLMKEGKQAFR
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE
LEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHVK
ECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PKKYMITSMLIAFIGAVFVITKGDMSFFLTLKDNMFSLACIFVGVVGWVIYTMGGQTCSD
CHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC
WSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTISIVKYDLLFMMTLPGIVALLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLFVIAALIRNNVCQRKE
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ENINKRILEEEQLRQAV
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIILLLMKEGKQAFR
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE
LEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHVK
ECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PKKYMITSMLIAFIGAVFVITKGDMSFFLTLKDNMFSLACIFVGVVGWVIYTMGGQTCSD
CHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC
WSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTISIVKYDLLFMMTLPGIVALLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLFVIAALIRNNVCQRKE
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ENINKRILEEEQLRQAV
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]