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The map label for this gene is nusG [H]

Identifier: 218901298

GI number: 218901298

Start: 104280

End: 104570

Strand: Direct

Name: nusG [H]

Synonym: BCAH820_0106

Alternate gene names: 218901298

Gene position: 104280-104570 (Clockwise)

Preceding gene: 218901297

Following gene: 218901299

Centisome position: 1.97

GC content: 35.52

Gene sequence:

>291_bases
ATGGAAAAAAGTTGGTATGTTGTCCATACTTATTCTGGATATGAAAATAAAGTAAAAGCAAACCTAGAGAAACGTGTAGA
ATCAATGGGTATGCAAGATAAAATTTTCCGTGTTGTTGTCCCGGAAGAAGTAGAAGTAGAAATGAAAAACGGTAAAGAAA
AATTAATRAAAAGAAAAGTGTTCCCAGGTTATGTATTAGTAGAATTAATCATGACTGATGACTCTTGGTATGTTGTACGT
AACACGCCGGGTGTAACTGGGTTTCGTTGGCTCTTCTGGTTCTGGATCTAA

Upstream 100 bases:

>100_bases
AATGTTATTTATAAGAACTGTGTAAAAGCCCGGTGAACGGGTTTTTTCATTTGCGCAAAAAAATGTACGTCAGGGAGGGA
AGGACGCTCGTCCTAAATGA

Downstream 100 bases:

>100_bases
ACCATCACCTCTATTAGAAGAGGAAGTTGTTACCATTATGAAACATATGGGAATGGACAACGAAGTGGTTGATTTCGACT
TTGAACTTCATGAGACAGTA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MEKSWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEVEVEMKNGKEKLXKRKVFPGYVLVELIMTDDSWYVVR
NTPGVTGFRWLFWFWI

Sequences:

>Translated_96_residues
MEKSWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEVEVEMKNGKEKLXKRKVFPGYVLVELIMTDDSWYVVR
NTPGVTGFRWLFWFWI
>Mature_96_residues
MEKSWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEVEVEMKNGKEKLXKRKVFPGYVLVELIMTDDSWYVVR
NTPGVTGFRWLFWFWI

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=87, Percent_Identity=43.6781609195402, Blast_Score=84, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 11485; Mature: 11485

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEVEVEMKNGKEKLXKRKV
CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCHHHHHHCCC
FPGYVLVELIMTDDSWYVVRNTPGVTGFRWLFWFWI
CCCEEEEEEEEECCCEEEEECCCCCCHHEEEEEEEC
>Mature Secondary Structure
MEKSWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEVEVEMKNGKEKLXKRKV
CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCHHHHHHCCC
FPGYVLVELIMTDDSWYVVRNTPGVTGFRWLFWFWI
CCCEEEEEEEEECCCEEEEECCCCCCHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]