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The map label for this gene is yabM [H]

Identifier: 218901257

GI number: 218901257

Start: 58967

End: 60568

Strand: Direct

Name: yabM [H]

Synonym: BCAH820_0061

Alternate gene names: 218901257

Gene position: 58967-60568 (Clockwise)

Preceding gene: 218901256

Following gene: 218901258

Centisome position: 1.11

GC content: 34.83

Gene sequence:

>1602_bases
ATGGAATCGAAGAAGTATCAAGCCTTTTGGCGTGGGGCTATTATATTAACAATCGCAAGTTTTGTTACAAAGGTATTAAG
CGCTTTTTACCGTATTCCATATCAAAATATAGCGGGTGATATTGGTTTTTATATTTACCAACAAATATATCCGTTTTATG
GATTTTGTTTAATTTTAGCTACTTATGGGTTCCCCATTATAATTTCAAAAATGGTTGCGGAACGATTAGAACGAGGGAAA
AAACAAGAAGCAGAAGAAATTATTTGTGTATCTTTTTGGTTTTTATTAGGAATTGGTTTCATAGGATTTTTTACATTGTT
CTTTGGTGCCGAAGTAATTGCGACAGCCATGGGCGATATACACTTAGATAAGCTATTACGTGTTATTTCCTTTTCATTCA
TATTGATGCCGTTTTTATCTGTAGCAAGAGGATATTTCCAGGGGTTCAATAATATGGTGCCAACAGCTGTGTCGCAAGTG
ATAGAGCAAACGATTCGTGTTTCTATTATTGTATTTTTATCCCTATTCCTAATTGCTCATGAATTTGATTTATATACAGT
TGGTGCTGGTGCTATGCTAGGTTCAATCGCAGGTGGACTGATTGGGATTATCGTACTTATACTTTATATGCGTCATGACT
TTCGTTCTATATTCTTCAAAAGTGTAAAGAGGATTAAAGGGAAAAAGAAGATTATGAAAATCCTGTTTTGGCAGGGGTTA
GCGATTTGTGTTAGTAACTTAGTGCTTATTTTTATACAAATGGCTGATTCTGTTTCTTTCTATTCTTTACTTATTGGAGC
AGGAGAGCCGGCTGAAAGTGCAAAGGTGTTAAAAGGTGTTTATGACAGAAGTATCCCGCTTATGCAATTAGGTACTGTCG
TGACAACTTCTTTCTCGTTGTCGCTTATTCCAATTATTACAGCAGCGAAGGAAAGAGGAGATCTTACCTTTATTCGAGAA
AAGGTAAGGTTAGCAATGAAAATCACATTTGTTATCGGATTTGCAGCGGCCGTTGGATTAGCTTGTATTATCCAGCCTAC
GAATATTATGTTGTTTGAAAATAGTGATGGATCAGATGTTTTATCTATTTTATCCTTATCTATTTTATTTAGTTCATTGT
CAATTACAACCGCTTCTATTTTGCAAGGGTTAGGACAAACATTAAAACCAGCAATATTTGTTGTATTTGGAGGTTATTTG
AAGCTAGTTTTAAACTATATATTAATGCCGTATTTCGGTGCGAAGGGAGCCGCAATTGCAACTTTAGTTGCATTAATTGT
AATTTCCGTATTAAATAGTATGTTACTTATGCGGGTTGTATCGGAATCGCTTATCGATAAACGGAATATGTTAGGTATAG
TTATTAGTGGTTTCAGTATGGGATTTGTATTAATAATGTTTATGCGTGTATTGCAAATGTCTGGATTAGTAATGGATACA
AGTCATAGAGGTGTTGCAACATTTGAGGCGTTGTTAGGTGTAGCCATCGGCGGATTGGCATATATGTTTTTAATTTTAAA
ATTACGTGTATTTACGAAAGCGGAAATAGGAACGGTTATGAAAAAAGAGAAAAAAGAAGGTTCATTGAAGAAGAGTGGAT
AG

Upstream 100 bases:

>100_bases
GCGTTGCACGAACGTATTCTTACTTGTGTAGGTGAGTAAGCTTGTCCTTTTCTTTATGATATAATACGAGGGGTGAGAAT
AGAAAAAGGAGTTTTCTTGT

Downstream 100 bases:

>100_bases
AGGTGGCAGGTTGTGAGTGGAATCATTACTATTTTAGGATTAGGTGCTGGTGAATTAGATCAGTTAACGATGGGTGTATA
TCGAAAAATAAAAGAAGCAG

Product: polysaccharide synthase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMVAERLERGK
KQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV
IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIMKILFWQGL
AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIRE
KVRLAMKITFVIGFAAAVGLACIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGYL
KLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRVVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT
SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG

Sequences:

>Translated_533_residues
MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMVAERLERGK
KQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV
IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIMKILFWQGL
AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIRE
KVRLAMKITFVIGFAAAVGLACIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGYL
KLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRVVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT
SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG
>Mature_533_residues
MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMVAERLERGK
KQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV
IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIMKILFWQGL
AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIRE
KVRLAMKITFVIGFAAAVGLACIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGYL
KLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRVVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT
SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 58734; Mature: 58734

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYGFPIIISKMVAERLERGKKQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDI
HHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQVIEQTIRVSIIVFLSLFLIAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIMKILFWQGL
HCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSL
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SLIPIITAAKERGDLTFIREKVRLAMKITFVIGFAAAVGLACIIQPTNIMLFENSDGSDV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCHHH
LSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGYLKLVLNYILMPYFGAKGAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TLVALIVISVLNSMLLMRVVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]