| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884748
Identifier: 218884748
GI number: 218884748
Start: 1331315
End: 1331773
Strand: Reverse
Name: 218884748
Synonym: DKAM_1437
Alternate gene names: NA
Gene position: 1331773-1331315 (Counterclockwise)
Preceding gene: 218884749
Following gene: 218884747
Centisome position: 97.55
GC content: 38.78
Gene sequence:
>459_bases ATGAATTTAAGCTATAGCAGGATACTATATTATACGACAGTAATAGTATTCACAGCAATGCTCTTAACCCTGATCGCCTT GGTTGCTCTACCAATAATCCTGAACGGCTTCTCTCCCTTGGCCGTAGTAAAAGGATACAGCATGCTTCCAACACTAAGGG AGGGAGACATAGTTATCGTGCAAAAAGCGACTCCGGAGGCTATAAGACCCGGCGACGTGATAATATATAGTACTGGGGGA AAGCTCATAATACATAGGGTAATAAAAGTAGTAATCAGGGATGGAGAATACTATTATGTTACCAAGGGAGACAATAATTC ACTACCGGACTTTATGTATTTCGAAAACAACATAGGAATACCATATAATAGGGTACTTGGAAAAGTAGTAAGCATCAACG ATTATATAGTTAAAATACCTTATCTAGGGTACCTCGCCTTATTTCTTAAAGGAGGTTAA
Upstream 100 bases:
>100_bases GGGAGAAGATGAGTAAAGTAATTGAGGGCGGAGAGGAGCCGAGACCGCCTAAGGAAATCATACTGGATATCGACGACATT ATGAATGAGGAGTAATAGTA
Downstream 100 bases:
>100_bases ACCCGGCGGGAGCTATAGGGAATGTAGCCCAAACCTCCTGCTCCAAAGGAAACCCCTGCCCATCAATGCATGGAGGAGAT CGGGGTGAAGGAAGAAAAGA
Product: signal peptidase
Products: NA
Alternate protein names: Signal Peptidase; Archaean Signal Peptidase; Signal Peptide; Phage Repressor; Signal Peptidase I
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MNLSYSRILYYTTVIVFTAMLLTLIALVALPIILNGFSPLAVVKGYSMLPTLREGDIVIVQKATPEAIRPGDVIIYSTGG KLIIHRVIKVVIRDGEYYYVTKGDNNSLPDFMYFENNIGIPYNRVLGKVVSINDYIVKIPYLGYLALFLKGG
Sequences:
>Translated_152_residues MNLSYSRILYYTTVIVFTAMLLTLIALVALPIILNGFSPLAVVKGYSMLPTLREGDIVIVQKATPEAIRPGDVIIYSTGG KLIIHRVIKVVIRDGEYYYVTKGDNNSLPDFMYFENNIGIPYNRVLGKVVSINDYIVKIPYLGYLALFLKGG >Mature_152_residues MNLSYSRILYYTTVIVFTAMLLTLIALVALPIILNGFSPLAVVKGYSMLPTLREGDIVIVQKATPEAIRPGDVIIYSTGG KLIIHRVIKVVIRDGEYYYVTKGDNNSLPDFMYFENNIGIPYNRVLGKVVSINDYIVKIPYLGYLALFLKGG
Specific function: Unknown
COG id: COG0681
COG function: function code U; Signal peptidase I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.21.89
Molecular weight: Translated: 16955; Mature: 16955
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00501 SPASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSYSRILYYTTVIVFTAMLLTLIALVALPIILNGFSPLAVVKGYSMLPTLREGDIVIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEE QKATPEAIRPGDVIIYSTGGKLIIHRVIKVVIRDGEYYYVTKGDNNSLPDFMYFENNIGI ECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCC PYNRVLGKVVSINDYIVKIPYLGYLALFLKGG CHHHHHHHHEECCCEEEEECHHHHHHHHCCCC >Mature Secondary Structure MNLSYSRILYYTTVIVFTAMLLTLIALVALPIILNGFSPLAVVKGYSMLPTLREGDIVIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEE QKATPEAIRPGDVIIYSTGGKLIIHRVIKVVIRDGEYYYVTKGDNNSLPDFMYFENNIGI ECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCC PYNRVLGKVVSINDYIVKIPYLGYLALFLKGG CHHHHHHHHEECCCEEEEECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA