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The map label for this gene is yufP [H]

Identifier: 218884704

GI number: 218884704

Start: 1294834

End: 1295862

Strand: Reverse

Name: yufP [H]

Synonym: DKAM_1393

Alternate gene names: 218884704

Gene position: 1295862-1294834 (Counterclockwise)

Preceding gene: 218884705

Following gene: 218884703

Centisome position: 94.92

GC content: 49.66

Gene sequence:

>1029_bases
GTGCCTGAGGCCTCTAACTACATGAGGATAGTCAAGGTGATTATAGAGGAAGCCGTCTCACTCTTGGTGGGCTTCGCAGT
AGCCGTAATCATATTGTTGTTCAGCGGGTATGAACCACTCTCTGTTATCAGTATCCTGTTCAGCGAGGGATTCAGGAATA
CAGAGGTATTAATGAAGCAAAGCATACCAGTGATCGCGACAGGGCTCGCGTTCTCTATACCCGCCTTAGCCGGGTTATTC
AATATAGGAGGCGAGTCCCAGCTGTACATAGGTGCCTTTACAGGGCTTGTGTCAACATATATTATATATAACGCCACCGG
CCAACCCGTGTTATCCTCCGTAACAGGCCTGGTATCAGGGACCTTGGCAGGGGGATTCTGGGGCTTTATAATAGGGTATT
TGAGGGCGCGCAGGAGTGTTAACGAGGTTGTCGTCGCGATAATGATGAACTGGACCACTTACTATCTCGTGCTCTACTTA
ATTGTCTCGAGGTTCACCGACCCGATCTACTCCCATATGAGTGTCTTCGTGCCCGCATCCTCCAGGATACCCGATGTCCT
CGGCTTCATAATGATTGCCGGAGTGGCTGTACTGACATACATCGTGTTAAGGTATAGCTCGCTCGGCTACTCTATAAGGG
TTGCCGGCTTGAATCCTAAGGCAGCTGTTTACGCCGGGTTCAACTTGGAGAAGATCTTCATAACAGCTATGTCTATTTCT
GGAGCGATCGCTGGACTCGGGGGCGCGCTCTTCGTGCTCTCAGTCATATACTCGATTGATACGACGATGTCCGCTATCTA
TGGCCTCGGCTTCCTCGGTATAGGTATAGGCTTACTTGGAAGGAATAACCCCATTGGGGTGGTGTTAGCCGGGTTATTTA
TAAGTGGACTCCAATTCGGCGGGCAATGGGTTGAGCTACGTACTGGGGCACCTCCCTACTTAACCGATGTAGTCATAGGT
ATCATAGTTATTGCTTTATCAGCTACCTACACCTACGAGCTACTGGTATCCAAGTTGAGGAGGGGATAG

Upstream 100 bases:

>100_bases
AGCGATAGGATAATCGTGATGTACGAGGGTAGAGTAATTGGTGAGGGAAGAACAGAGGAATTTACCCTTGAGAAGCTAGG
GCTTTTAATGGGTGGTATCA

Downstream 100 bases:

>100_bases
AATGATAGATTTCCTTATAGCCTTAATCGAGAACACGCTGTATTCAGCTACAGTAGTGTTACTCGGAGCGCTTGGAGCCA
TAATCAATGAGAAAAGCGGT

Product: Putative ABC-type transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MPEASNYMRIVKVIIEEAVSLLVGFAVAVIILLFSGYEPLSVISILFSEGFRNTEVLMKQSIPVIATGLAFSIPALAGLF
NIGGESQLYIGAFTGLVSTYIIYNATGQPVLSSVTGLVSGTLAGGFWGFIIGYLRARRSVNEVVVAIMMNWTTYYLVLYL
IVSRFTDPIYSHMSVFVPASSRIPDVLGFIMIAGVAVLTYIVLRYSSLGYSIRVAGLNPKAAVYAGFNLEKIFITAMSIS
GAIAGLGGALFVLSVIYSIDTTMSAIYGLGFLGIGIGLLGRNNPIGVVLAGLFISGLQFGGQWVELRTGAPPYLTDVVIG
IIVIALSATYTYELLVSKLRRG

Sequences:

>Translated_342_residues
MPEASNYMRIVKVIIEEAVSLLVGFAVAVIILLFSGYEPLSVISILFSEGFRNTEVLMKQSIPVIATGLAFSIPALAGLF
NIGGESQLYIGAFTGLVSTYIIYNATGQPVLSSVTGLVSGTLAGGFWGFIIGYLRARRSVNEVVVAIMMNWTTYYLVLYL
IVSRFTDPIYSHMSVFVPASSRIPDVLGFIMIAGVAVLTYIVLRYSSLGYSIRVAGLNPKAAVYAGFNLEKIFITAMSIS
GAIAGLGGALFVLSVIYSIDTTMSAIYGLGFLGIGIGLLGRNNPIGVVLAGLFISGLQFGGQWVELRTGAPPYLTDVVIG
IIVIALSATYTYELLVSKLRRG
>Mature_341_residues
PEASNYMRIVKVIIEEAVSLLVGFAVAVIILLFSGYEPLSVISILFSEGFRNTEVLMKQSIPVIATGLAFSIPALAGLFN
IGGESQLYIGAFTGLVSTYIIYNATGQPVLSSVTGLVSGTLAGGFWGFIIGYLRARRSVNEVVVAIMMNWTTYYLVLYLI
VSRFTDPIYSHMSVFVPASSRIPDVLGFIMIAGVAVLTYIVLRYSSLGYSIRVAGLNPKAAVYAGFNLEKIFITAMSISG
AIAGLGGALFVLSVIYSIDTTMSAIYGLGFLGIGIGLLGRNNPIGVVLAGLFISGLQFGGQWVELRTGAPPYLTDVVIGI
IVIALSATYTYELLVSKLRRG

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36484; Mature: 36353

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEASNYMRIVKVIIEEAVSLLVGFAVAVIILLFSGYEPLSVISILFSEGFRNTEVLMKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHC
SIPVIATGLAFSIPALAGLFNIGGESQLYIGAFTGLVSTYIIYNATGQPVLSSVTGLVSG
CCCEEEHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH
TLAGGFWGFIIGYLRARRSVNEVVVAIMMNWTTYYLVLYLIVSRFTDPIYSHMSVFVPAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCC
SRIPDVLGFIMIAGVAVLTYIVLRYSSLGYSIRVAGLNPKAAVYAGFNLEKIFITAMSIS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCHHHHEEEHHHHH
GAIAGLGGALFVLSVIYSIDTTMSAIYGLGFLGIGIGLLGRNNPIGVVLAGLFISGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
GQWVELRTGAPPYLTDVVIGIIVIALSATYTYELLVSKLRRG
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEASNYMRIVKVIIEEAVSLLVGFAVAVIILLFSGYEPLSVISILFSEGFRNTEVLMKQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHC
SIPVIATGLAFSIPALAGLFNIGGESQLYIGAFTGLVSTYIIYNATGQPVLSSVTGLVSG
CCCEEEHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH
TLAGGFWGFIIGYLRARRSVNEVVVAIMMNWTTYYLVLYLIVSRFTDPIYSHMSVFVPAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCC
SRIPDVLGFIMIAGVAVLTYIVLRYSSLGYSIRVAGLNPKAAVYAGFNLEKIFITAMSIS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCHHHHEEEHHHHH
GAIAGLGGALFVLSVIYSIDTTMSAIYGLGFLGIGIGLLGRNNPIGVVLAGLFISGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
GQWVELRTGAPPYLTDVVIGIIVIALSATYTYELLVSKLRRG
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]