| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is gcp [H]
Identifier: 218884651
GI number: 218884651
Start: 1249083
End: 1249760
Strand: Reverse
Name: gcp [H]
Synonym: DKAM_1340
Alternate gene names: 218884651
Gene position: 1249760-1249083 (Counterclockwise)
Preceding gene: 218884652
Following gene: 218884650
Centisome position: 91.54
GC content: 44.4
Gene sequence:
>678_bases ATGGCTCTAAGCAGTGAGAGCAATCTATGGGGGGCTGAAGCCGTTATATACATAGGTGAGTTCCTGGGTAGAAAAGTAGT CATCAAGAAACGTAGGAGTAAGCAATATAGACACCCAGTCTACGACACTATATTTATACAGGCGAGAACGAGGAATGAGG CAAAGATACTTGCAGAACTCTATGCAGCCGGATTAAAGGTACCAGCCCCTCTACTAGTGGATGTCGAGAAAGGAGCATTA GTGATGGAGTATATCGAGGGTGAGAGACTTTCCGAGAAGCTAGCCGATATAGAGGCTAGAGAGCTCGTAGAAATAGCATG GGATATAGGAAGGCAGAGCGCGTTAATGCATAATAGGAAGATCTATCACGGGGACCTCACTATTGCGAACATTATATATT CCGGCAGGGGGGTCTACATAATAGACTTCGGCTTAGCCGGCTACAGCACCGATATCGAGGAGCATGCTATAGATATACAT TTACTCCAGAAAAGCATTTACTCGCTCTACCCTCATCTATTAAAACCCTTTATGGAGTCGTATTTTAAAGCCTATAGAGA GTATTACAGCGGCAGCTTCGATGAAATCATGTATAAACTAAGGGAGATAAGCACGCGGGGTAGATACATTGATAGGGAGT TAAGGAGATCGGTGATGCGTGAGAGATATGTCGGTTAA
Upstream 100 bases:
>100_bases TAGCTTATACAGGGCTCCTATTATATCTATATGGTAGGACAAGTAAGCCTGAGGAAACACATGTAAAACAGAGATACAGG ATTGATGAGGAGGCTTATCC
Downstream 100 bases:
>100_bases ACTATTGCTTCTCTCAGGTAACAGACACAAGTACCTTGAGATAAAGGACATAGCGAGGGAGTACGGGGTCAATGTCGCTC CCCTCGAGGGATTAAAAATC
Product: Mn2+-dependent serine/threonine protein kinase
Products: NA
Alternate protein names: Glycoprotease [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MALSSESNLWGAEAVIYIGEFLGRKVVIKKRRSKQYRHPVYDTIFIQARTRNEAKILAELYAAGLKVPAPLLVDVEKGAL VMEYIEGERLSEKLADIEARELVEIAWDIGRQSALMHNRKIYHGDLTIANIIYSGRGVYIIDFGLAGYSTDIEEHAIDIH LLQKSIYSLYPHLLKPFMESYFKAYREYYSGSFDEIMYKLREISTRGRYIDRELRRSVMRERYVG
Sequences:
>Translated_225_residues MALSSESNLWGAEAVIYIGEFLGRKVVIKKRRSKQYRHPVYDTIFIQARTRNEAKILAELYAAGLKVPAPLLVDVEKGAL VMEYIEGERLSEKLADIEARELVEIAWDIGRQSALMHNRKIYHGDLTIANIIYSGRGVYIIDFGLAGYSTDIEEHAIDIH LLQKSIYSLYPHLLKPFMESYFKAYREYYSGSFDEIMYKLREISTRGRYIDRELRRSVMRERYVG >Mature_224_residues ALSSESNLWGAEAVIYIGEFLGRKVVIKKRRSKQYRHPVYDTIFIQARTRNEAKILAELYAAGLKVPAPLLVDVEKGALV MEYIEGERLSEKLADIEARELVEIAWDIGRQSALMHNRKIYHGDLTIANIIYSGRGVYIIDFGLAGYSTDIEEHAIDIHL LQKSIYSLYPHLLKPFMESYFKAYREYYSGSFDEIMYKLREISTRGRYIDRELRRSVMRERYVG
Specific function: Unknown
COG id: COG3642
COG function: function code T; Mn2+-dependent serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI41327715, Length=212, Percent_Identity=33.4905660377358, Blast_Score=107, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6321701, Length=236, Percent_Identity=30.0847457627119, Blast_Score=90, Evalue=3e-19, Organism=Drosophila melanogaster, GI24658177, Length=213, Percent_Identity=32.8638497652582, Blast_Score=114, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022449 - InterPro: IPR022495 - InterPro: IPR011009 - InterPro: IPR009220 - InterPro: IPR000905 - InterPro: IPR017860 - InterPro: IPR017861 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR008266 [H]
Pfam domain/function: PF00814 Peptidase_M22; PF00069 Pkinase [H]
EC number: =3.4.24.57 [H]
Molecular weight: Translated: 26157; Mature: 26025
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS00109 PROTEIN_KINASE_TYR ; PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSSESNLWGAEAVIYIGEFLGRKVVIKKRRSKQYRHPVYDTIFIQARTRNEAKILAEL CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH YAAGLKVPAPLLVDVEKGALVMEYIEGERLSEKLADIEARELVEIAWDIGRQSALMHNRK HHCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCE IYHGDLTIANIIYSGRGVYIIDFGLAGYSTDIEEHAIDIHLLQKSIYSLYPHLLKPFMES EEECCCCEEHEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFKAYREYYSGSFDEIMYKLREISTRGRYIDRELRRSVMRERYVG HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALSSESNLWGAEAVIYIGEFLGRKVVIKKRRSKQYRHPVYDTIFIQARTRNEAKILAEL CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH YAAGLKVPAPLLVDVEKGALVMEYIEGERLSEKLADIEARELVEIAWDIGRQSALMHNRK HHCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCE IYHGDLTIANIIYSGRGVYIIDFGLAGYSTDIEEHAIDIHLLQKSIYSLYPHLLKPFMES EEECCCCEEHEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFKAYREYYSGSFDEIMYKLREISTRGRYIDRELRRSVMRERYVG HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]