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The map label for this gene is rps15p [H]

Identifier: 218884649

GI number: 218884649

Start: 1247917

End: 1248417

Strand: Reverse

Name: rps15p [H]

Synonym: DKAM_1338

Alternate gene names: 218884649

Gene position: 1248417-1247917 (Counterclockwise)

Preceding gene: 218884650

Following gene: 218884648

Centisome position: 91.44

GC content: 45.71

Gene sequence:

>501_bases
ATGAATAAGAGGAGGGATAAGGGTCAATCGCATTCAACCCGGCCGGCGAGGGCTGGGCCACCGAGATGGTTAAAGCTAGA
TATGAGTCCAAGCGATATAGAGTTGCTGATCGTAGAGTTGGCGAAGAAAGGGTATACCCCATCAATGATAGGAGTAATTC
TTAGGGATCAATATGGTATCCCATTAGTAAGACAAGTAACAGGTAGGAAGCTCACGGAGATCCTTGAAAAACACGGCATT
AAAATCACTATACCAGAGGACCTTATGCATTTAATGCAACAGGCTGTCAACCTCAGAAGACACCTCGAGGAGCATCCCAA
GGATACCCATAGTTTAAGAGGGCTTATAGAGGTAGAGTCGAAAATACATCGTCTAGTGAAGTACTATAAGAGAACCGGCA
AACTACCCTCTGACTGGGAGTATGATCCAGAGAAAGCAAAACTCCTGGTTTCACAGGGCATATACGTTTTCAAAACCGAA
AGCCCCACCACCTCAGGCTGA

Upstream 100 bases:

>100_bases
GTTACCACAGGAGTCACATTTAAAATCTGTTCTTAAATATTATGGTGTTTAATAGTGTATTGTTTAACCCGGGATATAGT
GTCAACGGGGTTGCAGAGCT

Downstream 100 bases:

>100_bases
CCTCCACCCCGCCCTAAAGAGTGGGGGGTCCCCTTTAGGGGGTTCATTGGTTCCCTCCATCTATTCGGGGATGCATCTTT
TATCTGGAGGGCAGGTCGAA

Product: 30S ribosomal protein S15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNKRRDKGQSHSTRPARAGPPRWLKLDMSPSDIELLIVELAKKGYTPSMIGVILRDQYGIPLVRQVTGRKLTEILEKHGI
KITIPEDLMHLMQQAVNLRRHLEEHPKDTHSLRGLIEVESKIHRLVKYYKRTGKLPSDWEYDPEKAKLLVSQGIYVFKTE
SPTTSG

Sequences:

>Translated_166_residues
MNKRRDKGQSHSTRPARAGPPRWLKLDMSPSDIELLIVELAKKGYTPSMIGVILRDQYGIPLVRQVTGRKLTEILEKHGI
KITIPEDLMHLMQQAVNLRRHLEEHPKDTHSLRGLIEVESKIHRLVKYYKRTGKLPSDWEYDPEKAKLLVSQGIYVFKTE
SPTTSG
>Mature_166_residues
MNKRRDKGQSHSTRPARAGPPRWLKLDMSPSDIELLIVELAKKGYTPSMIGVILRDQYGIPLVRQVTGRKLTEILEKHGI
KITIPEDLMHLMQQAVNLRRHLEEHPKDTHSLRGLIEVESKIHRLVKYYKRTGKLPSDWEYDPEKAKLLVSQGIYVFKTE
SPTTSG

Specific function: Unknown

COG id: COG0184

COG function: function code J; Ribosomal protein S15P/S13E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S15P family [H]

Homologues:

Organism=Homo sapiens, GI4506685, Length=145, Percent_Identity=48.2758620689655, Blast_Score=130, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI17554774, Length=145, Percent_Identity=46.2068965517241, Blast_Score=122, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6320269, Length=145, Percent_Identity=45.5172413793103, Blast_Score=123, Evalue=2e-29,
Organism=Drosophila melanogaster, GI85724904, Length=145, Percent_Identity=46.8965517241379, Blast_Score=126, Evalue=6e-30,
Organism=Drosophila melanogaster, GI17136832, Length=145, Percent_Identity=46.8965517241379, Blast_Score=126, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012606
- InterPro:   IPR000589
- InterPro:   IPR023029
- InterPro:   IPR009068 [H]

Pfam domain/function: PF08069 Ribosomal_S13_N; PF00312 Ribosomal_S15 [H]

EC number: NA

Molecular weight: Translated: 19102; Mature: 19102

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRRDKGQSHSTRPARAGPPRWLKLDMSPSDIELLIVELAKKGYTPSMIGVILRDQYGI
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PLVRQVTGRKLTEILEKHGIKITIPEDLMHLMQQAVNLRRHLEEHPKDTHSLRGLIEVES
CHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KIHRLVKYYKRTGKLPSDWEYDPEKAKLLVSQGIYVFKTESPTTSG
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCC
>Mature Secondary Structure
MNKRRDKGQSHSTRPARAGPPRWLKLDMSPSDIELLIVELAKKGYTPSMIGVILRDQYGI
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PLVRQVTGRKLTEILEKHGIKITIPEDLMHLMQQAVNLRRHLEEHPKDTHSLRGLIEVES
CHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KIHRLVKYYKRTGKLPSDWEYDPEKAKLLVSQGIYVFKTESPTTSG
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA