Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884647

Identifier: 218884647

GI number: 218884647

Start: 1246014

End: 1246331

Strand: Reverse

Name: 218884647

Synonym: DKAM_1336

Alternate gene names: NA

Gene position: 1246331-1246014 (Counterclockwise)

Preceding gene: 218884648

Following gene: 218884646

Centisome position: 91.29

GC content: 41.19

Gene sequence:

>318_bases
ATGTGTAGTCAAGTAGCGTATCCCTGTGGGAAAATAGTTGTTAAAGGTAGTAAGCAATACATTAACGCTGTCCACGCGTC
GCTTCACCCAGATAACACGAAGCCTGCACCAAGAATGAAGATCAATGAGGTGCTTGAAGAGGACACTTATGTGATAGAAA
TATGTGTTTCAAACAACCTGTTAGATGCAGTGAGGTCGCTATGCTCCACAATAGATGAATTACTGGGACTACTTGAAGTA
ATCGACTCTATAGAGGTCTATTCATCCATGGGATCCGGCTTCATGAAAAGTAATACCTCGATGAATAGTGTTAATTAG

Upstream 100 bases:

>100_bases
CAATACTTTATAATGGCCAGAAGATAACCGAGTTAAGGGAGCTCTTAAGAGTAGGCATTAAACCCGAGGAAGCATACACA
CTATGCGATGAGGTCCAATT

Downstream 100 bases:

>100_bases
TATGTATAATGAATATATTTAAATATCCCTTTACTAATCTAGGACGCCTTAGTGAAAACGGTTACCAGGGTTGTTAGGAA
TGTCTTCCAAGCACAGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MCSQVAYPCGKIVVKGSKQYINAVHASLHPDNTKPAPRMKINEVLEEDTYVIEICVSNNLLDAVRSLCSTIDELLGLLEV
IDSIEVYSSMGSGFMKSNTSMNSVN

Sequences:

>Translated_105_residues
MCSQVAYPCGKIVVKGSKQYINAVHASLHPDNTKPAPRMKINEVLEEDTYVIEICVSNNLLDAVRSLCSTIDELLGLLEV
IDSIEVYSSMGSGFMKSNTSMNSVN
>Mature_105_residues
MCSQVAYPCGKIVVKGSKQYINAVHASLHPDNTKPAPRMKINEVLEEDTYVIEICVSNNLLDAVRSLCSTIDELLGLLEV
IDSIEVYSSMGSGFMKSNTSMNSVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11470; Mature: 11470

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSQVAYPCGKIVVKGSKQYINAVHASLHPDNTKPAPRMKINEVLEEDTYVIEICVSNNL
CCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCH
LDAVRSLCSTIDELLGLLEVIDSIEVYSSMGSGFMKSNTSMNSVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCSQVAYPCGKIVVKGSKQYINAVHASLHPDNTKPAPRMKINEVLEEDTYVIEICVSNNL
CCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCH
LDAVRSLCSTIDELLGLLEVIDSIEVYSSMGSGFMKSNTSMNSVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA