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The map label for this gene is pfdB [H]

Identifier: 218884630

GI number: 218884630

Start: 1233951

End: 1234316

Strand: Reverse

Name: pfdB [H]

Synonym: DKAM_1319

Alternate gene names: 218884630

Gene position: 1234316-1233951 (Counterclockwise)

Preceding gene: 218884631

Following gene: 218884629

Centisome position: 90.41

GC content: 41.8

Gene sequence:

>366_bases
ATGAGTGAAAAAACCCTCCCGCCCGAGGTCCAACAATTACTAATCCAGTATCAGACCTTAAGGGAGCACCAGGCTAGAAT
AGATGCTGAGCTAAAAATGGTTGAGGCTGAACTCAGCGATGTAGAGAATGTAATGGATACTCTAAAGAATGTTGATGATA
GTACAGAGCTATACAAGGTCGTAGGACATGTCATCGTCAAGAAGAACAAGGCAGATATCGTGAAGGAACTCGAGGAAAGA
AAAGAGCTACTTGTGGTTAAAAGAGATAAGTACCGTAAGCAATTAGAATTCCTCAACAAGCAGGTTAACGAGTTGGAGGG
ACGTATTAAGGAGGCATTAAGCAAGCATGGATTATCAATCGAATGA

Upstream 100 bases:

>100_bases
ATCAGGTTCTCATGTAGTAAAGCCAGTATTTTAAAAGCCTTAAATAACAGCTTTACAAATATAGTACTCATGCTATTAGA
CTTGGTAAGGTGTTTAGGAA

Downstream 100 bases:

>100_bases
CAGGGTTCTCGGCAGAATAAATATTCAGGGACTCACCGAGGATATGCTGGAAAATATAATCAGTAAAGTAGATGAGAAAG
TATCAGAGTACCTAGTATCA

Product: prefoldin subunit beta

Products: NA

Alternate protein names: GimC subunit beta [H]

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSEKTLPPEVQQLLIQYQTLREHQARIDAELKMVEAELSDVENVMDTLKNVDDSTELYKVVGHVIVKKNKADIVKELEER
KELLVVKRDKYRKQLEFLNKQVNELEGRIKEALSKHGLSIE

Sequences:

>Translated_121_residues
MSEKTLPPEVQQLLIQYQTLREHQARIDAELKMVEAELSDVENVMDTLKNVDDSTELYKVVGHVIVKKNKADIVKELEER
KELLVVKRDKYRKQLEFLNKQVNELEGRIKEALSKHGLSIE
>Mature_120_residues
SEKTLPPEVQQLLIQYQTLREHQARIDAELKMVEAELSDVENVMDTLKNVDDSTELYKVVGHVIVKKNKADIVKELEERK
ELLVVKRDKYRKQLEFLNKQVNELEGRIKEALSKHGLSIE

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding [H]

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053 [H]

Pfam domain/function: PF01920 Prefoldin_2 [H]

EC number: NA

Molecular weight: Translated: 14127; Mature: 13995

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKTLPPEVQQLLIQYQTLREHQARIDAELKMVEAELSDVENVMDTLKNVDDSTELYKV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VGHVIVKKNKADIVKELEERKELLVVKRDKYRKQLEFLNKQVNELEGRIKEALSKHGLSI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
E
C
>Mature Secondary Structure 
SEKTLPPEVQQLLIQYQTLREHQARIDAELKMVEAELSDVENVMDTLKNVDDSTELYKV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VGHVIVKKNKADIVKELEERKELLVVKRDKYRKQLEFLNKQVNELEGRIKEALSKHGLSI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA