| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884624
Identifier: 218884624
GI number: 218884624
Start: 1225467
End: 1226696
Strand: Reverse
Name: 218884624
Synonym: DKAM_1313
Alternate gene names: NA
Gene position: 1226696-1225467 (Counterclockwise)
Preceding gene: 218884625
Following gene: 218884623
Centisome position: 89.85
GC content: 43.9
Gene sequence:
>1230_bases ATGTTGGCTGTAACCATTATTCTAGTGATTTTATCGATAATACTACATATGCCCATAGAAGTCCAGGAAGCGGTTTTTAA GCATGTGATACTGGGCTCCCCCCTATACAATGATGTATACGCCCTAGTTAAATACGTGTTCTATAGTGAGCCATGTAATC AAGCCAGTTGGTTCTGGATAGATAGAAACGATGCTTTTTCTCTTTGCAGGGGTGGATCAGCCCTAGTCATCCCCTTTATA GATTACAGGTTAAACCAGCCTCCCCTCGCAGGTTTCATCCTAGCATTGATCACCATGTTTGGCCTACAGTACTCGGCTGG ACCAGGTGTTTTTCTAACGATCTCCTACATGCTTCACTCGATCCTCTCTGCCATTGCGATCACCTATAGTGTCTACAGGG CATCCACCCGGTTCACTGCCAGGCTCTACCCGCTCTATGCTTTAACCATTGTGGTTTATGGTGTCTACGGTTTCGATACT TATGCGCTACCATTTATTATCGAGGCCTTGATAAGTATTAGGGAGGGTAAGCTGGGTAAGGCTGGATTATTCTCAGCGCT TGGTATGTCAATAAACTTTTTCACAATGGTCTTACTGGGTTTACTAATATATCTAGTAATCAGAGACAATATGGAGGGGA AATCCGTTATCACAGGCATACTGTTCGGATTAACCCCATACTTTATTATCGTATTCCTTGCCCCAGATTATCCAGGCTAC ATCTTAAACAACATGCTTCAACCAGCCTTTAATAACGGAGTCTTCTTACTACTCACATCAAAGCTGAGTGAGGGAGCCGC ATATGCTTTCAACACTGGGCTATGGCTATTTTTGATGCTAACGCTCTACTCTATGAGCCCGCCTCTAACTACTCATGATA AAGAGGAGGTCTTGAGATACATTGCAATATTAATGTTTTCATTATACAGCATACATCCACAAATGGTTCCACAGACACTT GTAATCACGCTCCTCCCACTAATAGCAACAAAGATGCGTGGAAACACTTTATTAACCCTGCTAATAGAGGCGGCCAATGC CTTAATCATCGCCCTATGGTTTGAGGCGGCAACTATTTCCAGCTACTTATCGAGCATCCTAGGCATAGTTTCATCGCCTC AGCCAACCTCCCTAGACAACCCAGTCCAATGGGTGGTTCAATTCAGGAACGCATTAGCAGTAGTATACAGTATAGACCTA CTACTGACCTCTCCCAGCCCTGAAGGATAA
Upstream 100 bases:
>100_bases GCTCTCTCCATAAAATGGGAGGACATAGTTGGAGTAAAGCTAGCAAGCTATATGTCACAAAGATAAATGGTGTTCGATAT TGGAATCCCGCATTAAATTA
Downstream 100 bases:
>100_bases CACAGTCTCATCAATGAAATGAAGCCATGTGGAAACAACGCCGGGGGCGGGATTTGAACCCGCGCGGGGAATCCCCCACC GGCTTAGCAGGCCGGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MLAVTIILVILSIILHMPIEVQEAVFKHVILGSPLYNDVYALVKYVFYSEPCNQASWFWIDRNDAFSLCRGGSALVIPFI DYRLNQPPLAGFILALITMFGLQYSAGPGVFLTISYMLHSILSAIAITYSVYRASTRFTARLYPLYALTIVVYGVYGFDT YALPFIIEALISIREGKLGKAGLFSALGMSINFFTMVLLGLLIYLVIRDNMEGKSVITGILFGLTPYFIIVFLAPDYPGY ILNNMLQPAFNNGVFLLLTSKLSEGAAYAFNTGLWLFLMLTLYSMSPPLTTHDKEEVLRYIAILMFSLYSIHPQMVPQTL VITLLPLIATKMRGNTLLTLLIEAANALIIALWFEAATISSYLSSILGIVSSPQPTSLDNPVQWVVQFRNALAVVYSIDL LLTSPSPEG
Sequences:
>Translated_409_residues MLAVTIILVILSIILHMPIEVQEAVFKHVILGSPLYNDVYALVKYVFYSEPCNQASWFWIDRNDAFSLCRGGSALVIPFI DYRLNQPPLAGFILALITMFGLQYSAGPGVFLTISYMLHSILSAIAITYSVYRASTRFTARLYPLYALTIVVYGVYGFDT YALPFIIEALISIREGKLGKAGLFSALGMSINFFTMVLLGLLIYLVIRDNMEGKSVITGILFGLTPYFIIVFLAPDYPGY ILNNMLQPAFNNGVFLLLTSKLSEGAAYAFNTGLWLFLMLTLYSMSPPLTTHDKEEVLRYIAILMFSLYSIHPQMVPQTL VITLLPLIATKMRGNTLLTLLIEAANALIIALWFEAATISSYLSSILGIVSSPQPTSLDNPVQWVVQFRNALAVVYSIDL LLTSPSPEG >Mature_409_residues MLAVTIILVILSIILHMPIEVQEAVFKHVILGSPLYNDVYALVKYVFYSEPCNQASWFWIDRNDAFSLCRGGSALVIPFI DYRLNQPPLAGFILALITMFGLQYSAGPGVFLTISYMLHSILSAIAITYSVYRASTRFTARLYPLYALTIVVYGVYGFDT YALPFIIEALISIREGKLGKAGLFSALGMSINFFTMVLLGLLIYLVIRDNMEGKSVITGILFGLTPYFIIVFLAPDYPGY ILNNMLQPAFNNGVFLLLTSKLSEGAAYAFNTGLWLFLMLTLYSMSPPLTTHDKEEVLRYIAILMFSLYSIHPQMVPQTL VITLLPLIATKMRGNTLLTLLIEAANALIIALWFEAATISSYLSSILGIVSSPQPTSLDNPVQWVVQFRNALAVVYSIDL LLTSPSPEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45364; Mature: 45364
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVTIILVILSIILHMPIEVQEAVFKHVILGSPLYNDVYALVKYVFYSEPCNQASWFWI CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEE DRNDAFSLCRGGSALVIPFIDYRLNQPPLAGFILALITMFGLQYSAGPGVFLTISYMLHS ECCCHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHH ILSAIAITYSVYRASTRFTARLYPLYALTIVVYGVYGFDTYALPFIIEALISIREGKLGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC AGLFSALGMSINFFTMVLLGLLIYLVIRDNMEGKSVITGILFGLTPYFIIVFLAPDYPGY HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHH ILNNMLQPAFNNGVFLLLTSKLSEGAAYAFNTGLWLFLMLTLYSMSPPLTTHDKEEVLRY HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH IAILMFSLYSIHPQMVPQTLVITLLPLIATKMRGNTLLTLLIEAANALIIALWFEAATIS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEHHHHHHHHHH SYLSSILGIVSSPQPTSLDNPVQWVVQFRNALAVVYSIDLLLTSPSPEG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCC >Mature Secondary Structure MLAVTIILVILSIILHMPIEVQEAVFKHVILGSPLYNDVYALVKYVFYSEPCNQASWFWI CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEE DRNDAFSLCRGGSALVIPFIDYRLNQPPLAGFILALITMFGLQYSAGPGVFLTISYMLHS ECCCHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHH ILSAIAITYSVYRASTRFTARLYPLYALTIVVYGVYGFDTYALPFIIEALISIREGKLGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC AGLFSALGMSINFFTMVLLGLLIYLVIRDNMEGKSVITGILFGLTPYFIIVFLAPDYPGY HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHH ILNNMLQPAFNNGVFLLLTSKLSEGAAYAFNTGLWLFLMLTLYSMSPPLTTHDKEEVLRY HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH IAILMFSLYSIHPQMVPQTLVITLLPLIATKMRGNTLLTLLIEAANALIIALWFEAATIS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEHHHHHHHHHH SYLSSILGIVSSPQPTSLDNPVQWVVQFRNALAVVYSIDLLLTSPSPEG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA