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The map label for this gene is rpl24p [H]

Identifier: 218884475

GI number: 218884475

Start: 1088245

End: 1088646

Strand: Reverse

Name: rpl24p [H]

Synonym: DKAM_1164

Alternate gene names: 218884475

Gene position: 1088646-1088245 (Counterclockwise)

Preceding gene: 218884476

Following gene: 218884474

Centisome position: 79.74

GC content: 46.27

Gene sequence:

>402_bases
ATGCCGTTAACAAATTCTATTAAGCCCGGTAAGCAGAGGAAGCAGTTGGCTTTAATGCCCCTCCACCTAAGGCATAAATT
ATTTAATGCACCACTCTCAGATGAACTGCGTCAGAAACTTGGCGTGAAGAGGTTGCCGGTTAGACAAGGCGATACTGTTA
GGATCATGAGGGGGGAGTTTAAAGGGCATGAGGGGAAGGTTGTAGAAGTCGACTTGAAACGCGTCAGGGTGTTCATCGAG
GGTGTGCAGAGAAAGAAGGCTGATGGATCGCCGGTTTACATTCCGATTCATCCTAGTAAAGTCATGATTATAAAGGCTGA
TCTAAGTGATAAAAGAAGGCTTGAGATAATTGAGCGGAGGAAGGCTGGTACTAGTAGTGAGCACAGTCAAGAGGTGGCTT
AG

Upstream 100 bases:

>100_bases
AAGGGCACCGAGATCAGGGGGCCTATAGCCAGGGAGGCAGCCGAGAGATGGCCCCAGATAGCTAATCTTGCATCAATGAT
TGTGTGAGGAGGTGTATACT

Downstream 100 bases:

>100_bases
AAATGGGTAGCATGGGTGGTAGCAGACATTTAAAAGCGATCAACGCGCCTAGGTATTGGCCTATACTTAGGAAGGAGTAT
AGGTGGGTTGTTAAGTCATC

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MPLTNSIKPGKQRKQLALMPLHLRHKLFNAPLSDELRQKLGVKRLPVRQGDTVRIMRGEFKGHEGKVVEVDLKRVRVFIE
GVQRKKADGSPVYIPIHPSKVMIIKADLSDKRRLEIIERRKAGTSSEHSQEVA

Sequences:

>Translated_133_residues
MPLTNSIKPGKQRKQLALMPLHLRHKLFNAPLSDELRQKLGVKRLPVRQGDTVRIMRGEFKGHEGKVVEVDLKRVRVFIE
GVQRKKADGSPVYIPIHPSKVMIIKADLSDKRRLEIIERRKAGTSSEHSQEVA
>Mature_132_residues
PLTNSIKPGKQRKQLALMPLHLRHKLFNAPLSDELRQKLGVKRLPVRQGDTVRIMRGEFKGHEGKVVEVDLKRVRVFIEG
VQRKKADGSPVYIPIHPSKVMIIKADLSDKRRLEIIERRKAGTSSEHSQEVA

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit [H]

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family [H]

Homologues:

Organism=Homo sapiens, GI4506621, Length=112, Percent_Identity=47.3214285714286, Blast_Score=100, Evalue=3e-22,
Organism=Homo sapiens, GI7705813, Length=112, Percent_Identity=47.3214285714286, Blast_Score=100, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17535693, Length=120, Percent_Identity=44.1666666666667, Blast_Score=95, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17535691, Length=95, Percent_Identity=43.1578947368421, Blast_Score=82, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI32564329, Length=92, Percent_Identity=44.5652173913043, Blast_Score=82, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6323376, Length=110, Percent_Identity=41.8181818181818, Blast_Score=78, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6321471, Length=110, Percent_Identity=41.8181818181818, Blast_Score=78, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21357853, Length=114, Percent_Identity=49.1228070175439, Blast_Score=107, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW [H]

EC number: NA

Molecular weight: Translated: 15188; Mature: 15057

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTNSIKPGKQRKQLALMPLHLRHKLFNAPLSDELRQKLGVKRLPVRQGDTVRIMRGEF
CCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCC
KGHEGKVVEVDLKRVRVFIEGVQRKKADGSPVYIPIHPSKVMIIKADLSDKRRLEIIERR
CCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHH
KAGTSSEHSQEVA
CCCCCCCCCCCCC
>Mature Secondary Structure 
PLTNSIKPGKQRKQLALMPLHLRHKLFNAPLSDELRQKLGVKRLPVRQGDTVRIMRGEF
CCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCC
KGHEGKVVEVDLKRVRVFIEGVQRKKADGSPVYIPIHPSKVMIIKADLSDKRRLEIIERR
CCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHH
KAGTSSEHSQEVA
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA