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The map label for this gene is 218884416

Identifier: 218884416

GI number: 218884416

Start: 1045918

End: 1046409

Strand: Reverse

Name: 218884416

Synonym: DKAM_1105

Alternate gene names: NA

Gene position: 1046409-1045918 (Counterclockwise)

Preceding gene: 218884417

Following gene: 218884415

Centisome position: 76.65

GC content: 45.73

Gene sequence:

>492_bases
ATGAGTGAATCACAGGAGTCCAGTGGAGGTGCGGCGAAGATATACGCGGTGAAAACAACACTGGGCAGAGAACTGGATAC
TGCTTTAATTATAGGTATGAGGATCGATGAGATGCGGGCGAGGGGAGAGGAAACCAGTATTGGAAGCATCATCATACCTC
CAAATGTAAGGGGCTACGTGTTCATCGAGGTTGAGAGGCTAGGCGAACTCTACAAGGTCATCTCCGATATCAGGTATATT
AAAGCCGGTAGGCCGATTAAGGTGTCCTACGAGGAATTCGAGAAGCTTTTGAAGCCTAAACCAGTTATAGAGGAACTTAA
CGTGGGTGATGAAGTAGAGATCACGAGGGGCCCGTTCAGGGGTATGCGTGCCAGGATAGCGGGCATAGATAGAAATAAAA
ACATGCTTACAGTGAATATTTTAGAGGCCGCTTTCACAATACCTATTACAATACCAGGTGATTATGTTAAGAAGATAAGT
AAGGGTGTGTAG

Upstream 100 bases:

>100_bases
TAAAGATAAGCTTACTCGGGCTAGCCATAGTAGGCGGCATCTCATTCGCTATAAGAATGATATTTTACACGTTTCTCTAC
CCCTACACTGGGTGATCGGC

Downstream 100 bases:

>100_bases
GAATGGTGAAGAAAACCATAAGGGTAATGGTTGAGGGAGGGAAGGCTACACCAGGCCCACCCCTAGGGCCTACCCTATCC
CCGTACAAGGTTAACATACC

Product: Putative transcription antitermination protein nusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSESQESSGGAAKIYAVKTTLGRELDTALIIGMRIDEMRARGEETSIGSIIIPPNVRGYVFIEVERLGELYKVISDIRYI
KAGRPIKVSYEEFEKLLKPKPVIEELNVGDEVEITRGPFRGMRARIAGIDRNKNMLTVNILEAAFTIPITIPGDYVKKIS
KGV

Sequences:

>Translated_163_residues
MSESQESSGGAAKIYAVKTTLGRELDTALIIGMRIDEMRARGEETSIGSIIIPPNVRGYVFIEVERLGELYKVISDIRYI
KAGRPIKVSYEEFEKLLKPKPVIEELNVGDEVEITRGPFRGMRARIAGIDRNKNMLTVNILEAAFTIPITIPGDYVKKIS
KGV
>Mature_162_residues
SESQESSGGAAKIYAVKTTLGRELDTALIIGMRIDEMRARGEETSIGSIIIPPNVRGYVFIEVERLGELYKVISDIRYIK
AGRPIKVSYEEFEKLLKPKPVIEELNVGDEVEITRGPFRGMRARIAGIDRNKNMLTVNILEAAFTIPITIPGDYVKKISK
GV

Specific function: Unknown

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR014723
- InterPro:   IPR011590
- InterPro:   IPR005100
- InterPro:   IPR006645
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF03439 Supt5 [H]

EC number: NA

Molecular weight: Translated: 18141; Mature: 18010

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESQESSGGAAKIYAVKTTLGRELDTALIIGMRIDEMRARGEETSIGSIIIPPNVRGYV
CCCCCCCCCCEEEEEEEECHHCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEECCCCCEEE
FIEVERLGELYKVISDIRYIKAGRPIKVSYEEFEKLLKPKPVIEELNVGDEVEITRGPFR
EEEHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCCCHHHCCCCCEEEEECCCCC
GMRARIAGIDRNKNMLTVNILEAAFTIPITIPGDYVKKISKGV
CHHEEEEECCCCCCEEEEEEEEEEEEEEEEECHHHHHHHHCCC
>Mature Secondary Structure 
SESQESSGGAAKIYAVKTTLGRELDTALIIGMRIDEMRARGEETSIGSIIIPPNVRGYV
CCCCCCCCCEEEEEEEECHHCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEECCCCCEEE
FIEVERLGELYKVISDIRYIKAGRPIKVSYEEFEKLLKPKPVIEELNVGDEVEITRGPFR
EEEHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCCCHHHCCCCCEEEEECCCCC
GMRARIAGIDRNKNMLTVNILEAAFTIPITIPGDYVKKISKGV
CHHEEEEECCCCCCEEEEEEEEEEEEEEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]