Click here to switch to the map view.

The map label for this gene is rplP0 [H]

Identifier: 218884413

GI number: 218884413

Start: 1043749

End: 1044750

Strand: Reverse

Name: rplP0 [H]

Synonym: DKAM_1102

Alternate gene names: 218884413

Gene position: 1044750-1043749 (Counterclockwise)

Preceding gene: 218884414

Following gene: 218884412

Centisome position: 76.53

GC content: 45.91

Gene sequence:

>1002_bases
ATGTCTCTTACAGCTAGGAAGATACCTGAGTGGAAGATTAAGGTAGTGGAGGAACTCGTTAACCTGATCAAGACCAGTAA
AGCTTTCGCTATAGCGGATATAACCGGTATTCCAGCCAACCACATTCAAATGCTGAGGAAGAAGCTGTATGGTAAAGCGG
AGTTGAGGGTGGTCAAGCCGAGACTGCTGGAGATCGCTTTAAAAAAGGCTGGCTTGAACCCGGAGCCGTTTAAAGAGTAT
CTCACTGGTCAAATACTGGTTGTATTCACCAATATGAATGCGTTCGAGCTTGCAATGCTGATGGACACTCATATAACTAA
ATCATACTTTAAGCCCGGTGAGAAAACAGATAGGGAGATAATCATACCTGAGGGTAACACTGGTATACCTCCGGGCCCCA
TGCTAAGTGTATTCGGAAGGCTCAAGATACCAACCAAGGTCCAGGGAAATGTTGTCTATGTAGCTAAGGATACAGTAGTG
GCTAAACCAGGTGAAGTTGTCTCTGGTGATCTAGCTAGCCTGCTCCAGAAACTGGGGCTGGCATTAAAAGAGATACGGCT
TAGACCTAAGATAGCTTATGAGGGTATTGTTATACCAGGCGATAAACTCATACTAAATCTAGACGAGTATAGAAACAACA
TTATGGCGGCTCACCTCGACGCCTTAAAGATAGCTGTTGAAGTAGCATTACCGGAGCCAGAAGTACTACCACTAGTTATA
TCAAGGGCTCACAGGCATGCCTTATCACTAGCTGTGGAAACAGGCTTTATAACACCTGAGACGGCTGAAATGGTATTCTT
ATCGGCTGTTGCCAAAGCCAACGCTTTAGCAGTTGAGGTAGCAAGGTATGCTCCAGAGCTGGGTATAGAGGTTAAACAGG
CTCCAGCACCAGTTAAACAGGAAGGCGAGAAGAAGGAGAAGGGTGAGGAGGAGAAGAAGGAGGAGTCTAAGGAGCTTAGT
GAGGAAGCCCTCTCAGAAGGTTTCTCAGCACTATTCGGTTGA

Upstream 100 bases:

>100_bases
CAGTGATAGAGCAGAGGCTTCCATCAGGTGCTGGTAACATTGCCAAGCTTGTTTTTAAGACTACAATGGGTATGCCGGTA
GAAGTATACAGGTGATTAAT

Downstream 100 bases:

>100_bases
GCCTGTTGCGGGTTCTAAATCCTTTCTAATTTGGATATTTTTGGATTTGTTTTATCTTCTCGGTGTCTTCACTCGCTTTC
CTCGATGACCATTACCTTTT

Product: acidic ribosomal protein P0

Products: NA

Alternate protein names: L10E [H]

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSLTARKIPEWKIKVVEELVNLIKTSKAFAIADITGIPANHIQMLRKKLYGKAELRVVKPRLLEIALKKAGLNPEPFKEY
LTGQILVVFTNMNAFELAMLMDTHITKSYFKPGEKTDREIIIPEGNTGIPPGPMLSVFGRLKIPTKVQGNVVYVAKDTVV
AKPGEVVSGDLASLLQKLGLALKEIRLRPKIAYEGIVIPGDKLILNLDEYRNNIMAAHLDALKIAVEVALPEPEVLPLVI
SRAHRHALSLAVETGFITPETAEMVFLSAVAKANALAVEVARYAPELGIEVKQAPAPVKQEGEKKEKGEEEKKEESKELS
EEALSEGFSALFG

Sequences:

>Translated_333_residues
MSLTARKIPEWKIKVVEELVNLIKTSKAFAIADITGIPANHIQMLRKKLYGKAELRVVKPRLLEIALKKAGLNPEPFKEY
LTGQILVVFTNMNAFELAMLMDTHITKSYFKPGEKTDREIIIPEGNTGIPPGPMLSVFGRLKIPTKVQGNVVYVAKDTVV
AKPGEVVSGDLASLLQKLGLALKEIRLRPKIAYEGIVIPGDKLILNLDEYRNNIMAAHLDALKIAVEVALPEPEVLPLVI
SRAHRHALSLAVETGFITPETAEMVFLSAVAKANALAVEVARYAPELGIEVKQAPAPVKQEGEKKEKGEEEKKEESKELS
EEALSEGFSALFG
>Mature_332_residues
SLTARKIPEWKIKVVEELVNLIKTSKAFAIADITGIPANHIQMLRKKLYGKAELRVVKPRLLEIALKKAGLNPEPFKEYL
TGQILVVFTNMNAFELAMLMDTHITKSYFKPGEKTDREIIIPEGNTGIPPGPMLSVFGRLKIPTKVQGNVVYVAKDTVVA
KPGEVVSGDLASLLQKLGLALKEIRLRPKIAYEGIVIPGDKLILNLDEYRNNIMAAHLDALKIAVEVALPEPEVLPLVIS
RAHRHALSLAVETGFITPETAEMVFLSAVAKANALAVEVARYAPELGIEVKQAPAPVKQEGEKKEKGEEEKKEESKELSE
EALSEGFSALFG

Specific function: Ribosomal protein P0 is the functional equivalent of E.coli protein L10 [H]

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001790
- InterPro:   IPR013522
- InterPro:   IPR022909 [H]

Pfam domain/function: PF00466 Ribosomal_L10 [H]

EC number: NA

Molecular weight: Translated: 36541; Mature: 36410

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTARKIPEWKIKVVEELVNLIKTSKAFAIADITGIPANHIQMLRKKLYGKAELRVVKP
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEECH
RLLEIALKKAGLNPEPFKEYLTGQILVVFTNMNAFELAMLMDTHITKSYFKPGEKTDREI
HHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
IIPEGNTGIPPGPMLSVFGRLKIPTKVQGNVVYVAKDTVVAKPGEVVSGDLASLLQKLGL
EEECCCCCCCCCHHHHHHHCCCCCCEECCCEEEEECCEEEECCCCCCCCHHHHHHHHHHH
ALKEIRLRPKIAYEGIVIPGDKLILNLDEYRNNIMAAHLDALKIAVEVALPEPEVLPLVI
HHHHHHCCCCEEECCEEECCCEEEEEHHHHHCHHHHHHHHHEEEEEEEECCCCCHHHHHH
SRAHRHALSLAVETGFITPETAEMVFLSAVAKANALAVEVARYAPELGIEVKQAPAPVKQ
HHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEECCCCCHHH
EGEKKEKGEEEKKEESKELSEEALSEGFSALFG
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLTARKIPEWKIKVVEELVNLIKTSKAFAIADITGIPANHIQMLRKKLYGKAELRVVKP
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEECH
RLLEIALKKAGLNPEPFKEYLTGQILVVFTNMNAFELAMLMDTHITKSYFKPGEKTDREI
HHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
IIPEGNTGIPPGPMLSVFGRLKIPTKVQGNVVYVAKDTVVAKPGEVVSGDLASLLQKLGL
EEECCCCCCCCCHHHHHHHCCCCCCEECCCEEEEECCEEEECCCCCCCCHHHHHHHHHHH
ALKEIRLRPKIAYEGIVIPGDKLILNLDEYRNNIMAAHLDALKIAVEVALPEPEVLPLVI
HHHHHHCCCCEEECCEEECCCEEEEEHHHHHCHHHHHHHHHEEEEEEEECCCCCHHHHHH
SRAHRHALSLAVETGFITPETAEMVFLSAVAKANALAVEVARYAPELGIEVKQAPAPVKQ
HHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEECCCCCHHH
EGEKKEKGEEEKKEESKELSEEALSEGFSALFG
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA